RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-216	ENST00000460957	TMEM33	P57088	247 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	MRPS11	P82912	194 aa	Known RBP	13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	TNFAIP6	P98066	277 aa	Predicted RBP	13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	CCNI	Q14094	377 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	EIF2B1	Q14232	305 aa	Known RBP	13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	SNAPC1	Q16533	368 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	ZNF362	Q5T0B9	420 aa	Predicted RBP	13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	ACSM5	Q6NUN0	579 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	PLBD1	Q6P4A8	553 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	LYPD4	Q6UWN0	246 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	AMIGO2	Q86SJ2	522 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	OR5AS1	Q8N127	324 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	OR2Z1	Q8NG97	314 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	HAVCR1	Q96D42	359 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	ZNF799	Q96GE5	643 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	TIMD4	Q96H15	378 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	POFUT1	Q9H488	388 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	ZNF275	Q9NSD4	429 aa	Predicted RBP	13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	ENOPH1	Q9UHY7	261 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	N6AMT1	Q9Y5N5	214 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957	VPS13C	Q709C8	3753 aa		13.56	□□□□□ -0.24
GGA1-216	ENST00000460957		A0A096LNT2	108 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	LOC100289279	A0A1B0GTE1	492 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	LRP5L	A4QPB2	252 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	CLDN25	C9JDP6	229 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	ZNF878	C9JN71	531 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	SURF4	O15260	269 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	GLCE	O94923	617 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	ACSM4	P0C7M7	580 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	SELE	P16581	610 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	ZNF16	P17020	682 aa	Predicted RBP	13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	MMP15	P51511	669 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	CRISP1	P54107	249 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	SLC3A1	Q07837	685 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	RIN1	Q13671	783 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	HLX	Q14774	488 aa	Predicted RBP	13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	TMEM236	Q5W0B7	351 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	SPATC1	Q76KD6	591 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	SHF	Q7M4L6	423 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	MRPL21	Q7Z2W9	205 aa	Known RBP	13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	PEG10	Q86TG7	708 aa	Known RBP	13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	C10orf67	Q8IYJ2	551 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	ZNF283	Q8N7M2	679 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	ZNRF4	Q8WWF5	429 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	LRTOMT	Q8WZ04	291 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	CCL17	Q92583	94 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	UTP4	Q969X6	686 aa	Known RBP	13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	SLAMF6	Q96DU3	332 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	MAP6	Q96JE9	813 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	ZNF582	Q96NG8	517 aa	Predicted RBP	13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	NMNAT2	Q9BZQ4	307 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	SEMA6A	Q9H2E6	1030 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	NTN4	Q9HB63	628 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	TVP23B	Q9NYZ1	205 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	KCNS2	Q9ULS6	477 aa		13.55	□□□□□ -0.24
GGA1-216	ENST00000460957	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	ZSCAN5B	A6NJL1	495 aa		13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	IGHV4-31	P0DP07	118 aa		13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	TNFRSF1A	P19438	455 aa		13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	KITLG	P21583	273 aa		13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	CRYBB2	P43320	205 aa		13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	DAP	P51397	102 aa		13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	ESRRG	P62508	458 aa		13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	GRB2	P62993	217 aa	Known RBP	13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	CDK5	Q00535	292 aa		13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	C6orf52	Q5T4I8	152 aa		13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	OR2T2	Q6IF00	324 aa		13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	FAM166A	Q6J272	317 aa		13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	ASRGL1	Q7L266	308 aa		13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	CPO	Q8IVL8	374 aa		13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	BHLHE23	Q8NDY6	225 aa		13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	YIPF5	Q969M3	257 aa		13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	ZMYND19	Q96E35	227 aa	Predicted RBP	13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	SLC25A19	Q9HC21	320 aa		13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	H2AFY2	Q9P0M6	372 aa	Predicted RBP	13.54	□□□□□ -0.24
GGA1-216	ENST00000460957	ISPD	A4D126	451 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	TGFA	P01135	160 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	APOC1	P02654	83 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	TACSTD2	P09758	323 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	PRKX	P51817	358 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	RAD23A	P54725	363 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	MVK	Q03426	396 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	KRTAP1-1	Q07627	177 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	TRIP10	Q15642	601 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	TEX30	Q5JUR7	227 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	LCN1P1	Q5VSP4	162 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	FAHD1	Q6P587	224 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	DRAM2	Q6UX65	266 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	FBXW12	Q6X9E4	464 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	PGAP1	Q75T13	922 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	CXXC5	Q7LFL8	322 aa	Known RBP	13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	DPY19L4	Q7Z388	723 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	PARP8	Q8N3A8	854 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	PYDC1	Q8WXC3	89 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	HPS1	Q92902	700 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	RAB1C	Q92928	201 aa		13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	DUS3L	Q96G46	650 aa	Known RBP	13.53	□□□□□ -0.24
GGA1-216	ENST00000460957	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.53	□□□□□ -0.24

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