RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 RPS15AP62244 130 aaKnown RBP10.48□□□□□ -0.73
CPSF3-202ENST00000460593 ZP2Q05996 745 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 LINC00346Q8IVM7 164 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 KDM8Q8N371 416 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 OTOSQ8NHW6 89 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 CD300LFQ8TDQ1 290 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 TCTEX1D2Q8WW35 142 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 PATE1Q8WXA2 126 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 ANKRD9Q96BM1 317 aaPredicted RBP10.48□□□□□ -0.73
CPSF3-202ENST00000460593 SMIM8Q96KF7 97 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 TEX101Q9BY14 249 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 EGLN1Q9GZT9 426 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 PTGES2Q9H7Z7 377 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 CNTD2Q9H8S5 307 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 PDE7BQ9NP56 450 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.48□□□□□ -0.73
CPSF3-202ENST00000460593 GDE1Q9NZC3 331 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 ASH2LQ9UBL3 628 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 GDF2Q9UK05 429 aaPredicted RBP10.48□□□□□ -0.73
CPSF3-202ENST00000460593 ATXN7L1Q9ULK2 861 aaPredicted RBP10.48□□□□□ -0.73
CPSF3-202ENST00000460593 MMP24Q9Y5R2 645 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 IFITM10A6NMD0 228 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 SLC16A7O60669 478 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 ZNF432O94892 652 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 MT-ND4LP03901 98 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 ARRB1P49407 418 aaPredicted RBP10.48□□□□□ -0.73
CPSF3-202ENST00000460593 ZNF616Q08AN1 781 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 UNC119Q13432 240 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 ZNF260Q3ZCT1 412 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 RNF212Q495C1 297 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 CHRDL2Q6WN34 429 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 GKN2Q86XP6 184 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 FAM3CQ92520 227 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 TMEM230Q96A57 120 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 BSCL2Q96G97 398 aaPredicted RBP10.48□□□□□ -0.73
CPSF3-202ENST00000460593 MEGF10Q96KG7 1140 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 LRFN5Q96NI6 719 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 OR8B4Q96RC9 309 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 SLC5A7Q9GZV3 580 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 MYOZ1Q9NP98 299 aaPredicted RBP10.48□□□□□ -0.73
CPSF3-202ENST00000460593 MMP25Q9NPA2 562 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 CKLFQ9UBR5 152 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 FBXL21Q9UKT6 434 aa10.48□□□□□ -0.73
CPSF3-202ENST00000460593 ARHGEF17Q96PE2 2063 aaPredicted RBP10.48□□□□□ -0.73
CPSF3-202ENST00000460593 P2RY10O00398 339 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 SDCBPO00560 298 aaPredicted RBP10.47□□□□□ -0.73
CPSF3-202ENST00000460593 OR6A2O95222 327 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 INHAP05111 366 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 HLA-GP17693 338 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 TSC22D1Q15714 1073 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 TMEM244Q5VVB8 128 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 LCN10Q6JVE6 187 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 BTNL8Q6UX41 500 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 CLEC18BQ6UXF7 455 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 COX15Q7KZN9 410 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 GALNTL5Q7Z4T8 443 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 OR9A4Q8NGU2 314 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 ZBP1Q9H171 429 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 RGCCQ9H4X1 137 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 SERINC4A6NH21 518 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 H0Y8X5 98 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 H7C1Q1 480 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 GATCO43716 136 aaKnown RBP10.47□□□□□ -0.73
CPSF3-202ENST00000460593 SMIM10L1P0DMW3 83 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 OR13C7P0DN81 318 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 SLC25A1P53007 311 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 AGBL4Q5VU57 503 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 SAMD14Q8IZD0 417 aaPredicted RBP10.47□□□□□ -0.73
CPSF3-202ENST00000460593 METTL27Q8N6F8 245 aaPredicted RBP10.47□□□□□ -0.73
CPSF3-202ENST00000460593 TAAR8Q969N4 342 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 SMIM10Q96HG1 83 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 PIGQQ9BRB3 760 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 RAB11FIP5Q9BXF6 653 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 SLC17A9Q9BYT1 436 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 EIF5A2Q9GZV4 153 aaKnown RBP10.47□□□□□ -0.73
CPSF3-202ENST00000460593 C5orf66Q9H5L9 145 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 MRPL22Q9NWU5 206 aaKnown RBP10.47□□□□□ -0.73
CPSF3-202ENST00000460593 SLC2A8Q9NY64 477 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 DEC1Q9P2X7 70 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 HIF3AQ9Y2N7 669 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 LOC107986453A0A1B0GWG9 222 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 DBX1A6NMT0 343 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 AP4M1O00189 453 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 GNALP38405 381 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 NDUFA6P56556 154 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 SCAND1P57086 179 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 DEFA6Q01524 100 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 SSBP1Q04837 148 aaKnown RBP10.47□□□□□ -0.73
CPSF3-202ENST00000460593 MEF2DQ14814 521 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 MIDNQ504T8 468 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 PSRC1Q6PGN9 363 aaPredicted RBP10.47□□□□□ -0.73
CPSF3-202ENST00000460593 FIGLAQ6QHK4 219 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 TMEM184AQ6ZMB5 413 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 OR10H5Q8NGA6 315 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 OR52N4Q8NGI2 321 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 ST7LQ8TDW4 575 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 ASB17Q8WXJ9 295 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 AQP3Q92482 292 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 SLAMF9Q96A28 289 aa10.47□□□□□ -0.73
CPSF3-202ENST00000460593 VWCEQ96DN2 955 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms