RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 ALG8Q9BVK2 526 aa9.56□□□□□ -0.88
SMNDC1-203ENST00000460483 MND1Q9BWT6 205 aa9.56□□□□□ -0.88
SMNDC1-203ENST00000460483 CCDC90BQ9GZT6 254 aa9.56□□□□□ -0.88
SMNDC1-203ENST00000460483 OR10A2Q9H208 303 aa9.56□□□□□ -0.88
SMNDC1-203ENST00000460483 NOP16Q9Y3C1 178 aaKnown RBP9.56□□□□□ -0.88
SMNDC1-203ENST00000460483 GRIP1Q9Y3R0 1128 aa9.56□□□□□ -0.88
SMNDC1-203ENST00000460483 UBR5O95071 2799 aaPredicted RBP9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 DOCK7Q96N67 2140 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 IGHV2OR16-5A0A0B4J2B6 119 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 TMEM269A0A1B0GVZ9 245 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 TMEM129A0AVI4 362 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 C19orf84I3L1E1 186 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 XRCC2O43543 280 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 MTRF1O75570 445 aaKnown RBP9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 ATE1O95260 518 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 CLDN1O95832 211 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 LCATP04180 440 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 LCKP06239 509 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 CDK1P06493 297 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 ANXA2P07355 339 aaKnown RBP9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 ZNF35P13682 527 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 ZNF12P17014 697 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 NR4A1P22736 598 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 CRHBPP24387 322 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 GLRXP35754 106 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 LIPAP38571 399 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 CX3CR1P49238 355 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 PSMA6P60900 246 aaKnown RBP9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 SMN1Q16637 294 aaKnown RBP9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 ZNF718Q3SXZ3 478 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 KCTD21Q4G0X4 260 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 CCDC58Q4VC31 144 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 ZMAT1Q5H9K5 638 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 ADAM5Q6NVV9 412 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 LYPD4Q6UWN0 246 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 PRSS48Q7RTY5 328 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 OR52N1Q8NH53 320 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 AKAP1Q92667 903 aaKnown RBP eCLIP9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 HTRA1Q92743 480 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 NR1H4Q96RI1 486 aaPredicted RBP9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 TBX5Q99593 518 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 DOK1Q99704 481 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 CDCA4Q9BXL8 241 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 DUSP21Q9H596 190 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 ZNF442Q9H7R0 627 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 NOX3Q9HBY0 568 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 TRIM36Q9NQ86 728 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 ERVK13-1Q9NX77 482 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 SLCO1C1Q9NYB5 712 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 CGGBP1Q9UFW8 167 aaPredicted RBP9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 GNG8Q9UK08 70 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 CMAHPQ9Y471 501 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 ATP23Q9Y6H3 246 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 ARHGAP21Q5T5U3 1957 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 KIAA1549Q9HCM3 1950 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 NBASA2RRP1 2371 aa9.55□□□□□ -0.88
SMNDC1-203ENST00000460483 MYO18BQ8IUG5 2567 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 DPRXA6NFQ7 191 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 LOC110117498-PIK3R3F6TDL0 507 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 J3QLW9 94 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 J3QRE1 110 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 XPNPEP2O43895 674 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 ERCC1P07992 297 aaPredicted RBP9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 ATP6V1B1P15313 513 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 ZNF19P17023 458 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 LORP23490 312 aaPredicted RBP9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 OTX1P32242 354 aaPredicted RBP9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 DDOSTP39656 456 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 RPS27P42677 84 aaKnown RBP9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 CHN2P52757 468 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 SLC35A2P78381 396 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 MVKQ03426 396 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 TLE4Q04727 773 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 TIGD6Q17RP2 521 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 CDONQ4KMG0 1287 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 AGAP6Q5VW22 663 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 RGS7BPQ6MZT1 257 aaPredicted RBP9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 LRRN1Q6UXK5 716 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 ZNF704Q6ZNC4 412 aaPredicted RBP9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 SPATC1Q76KD6 591 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 LHFPL3Q86UP9 236 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 TMEM200AQ86VY9 491 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 ZNF584Q8IVC4 421 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 FBXL14Q8N1E6 418 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 FGFBP3Q8TAT2 258 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 ABHD4Q8TB40 342 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 FCGR1BQ92637 280 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 THRSPQ92748 146 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 FBXW5Q969U6 566 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 PGAM5Q96HS1 289 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 ZNF75AQ96N20 296 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 C1QTNF5Q9BXJ0 243 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 COMMD4Q9H0A8 199 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 CLEC4MQ9H2X3 399 aaPredicted RBP9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 PNRC2Q9NPJ4 139 aaKnown RBP9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 CYSLTR2Q9NS75 346 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 CA10Q9NS85 328 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 NPAP1Q9NZP6 1156 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 AASSQ9UDR5 926 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 LRP12Q9Y561 859 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms