RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	SLC25A40	Q8TBP6	338 aa		11.02	□□□□□ -0.65
SNHG17-208	ENST00000456953	RAB40A	Q8WXH6	277 aa		11.02	□□□□□ -0.65
SNHG17-208	ENST00000456953	LRTOMT	Q8WZ04	291 aa		11.02	□□□□□ -0.65
SNHG17-208	ENST00000456953	DACT3	Q96B18	629 aa	Predicted RBP	11.02	□□□□□ -0.65
SNHG17-208	ENST00000456953	FAM71F1	Q96KD3	344 aa	Predicted RBP	11.02	□□□□□ -0.65
SNHG17-208	ENST00000456953	SAMD8	Q96LT4	415 aa		11.02	□□□□□ -0.65
SNHG17-208	ENST00000456953	PRSS27	Q9BQR3	290 aa		11.02	□□□□□ -0.65
SNHG17-208	ENST00000456953	TMEM43	Q9BTV4	400 aa		11.02	□□□□□ -0.65
SNHG17-208	ENST00000456953	OR2J1	Q9GZK6	312 aa		11.02	□□□□□ -0.65
SNHG17-208	ENST00000456953	SEMA6A	Q9H2E6	1030 aa		11.02	□□□□□ -0.65
SNHG17-208	ENST00000456953	MSL2	Q9HCI7	577 aa		11.02	□□□□□ -0.65
SNHG17-208	ENST00000456953	MAN2C1	Q9NTJ4	1040 aa		11.02	□□□□□ -0.65
SNHG17-208	ENST00000456953	LYVE1	Q9Y5Y7	322 aa		11.02	□□□□□ -0.65
SNHG17-208	ENST00000456953	TRBV4-1	A0A0J9YWV2	114 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	C5orf49	A4QMS7	147 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	CEACAM18	A8MTB9	384 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	CCNB2	O95067	398 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	QDPR	P09417	244 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	WNT2	P09544	360 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	PGA4	P0DJD7	388 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	PGA3	P0DJD8	388 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	TNFRSF1A	P19438	455 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	FUT4	P22083	530 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	TNFSF4	P23510	183 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	IFNGR2	P38484	337 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	ZNF84	P51523	738 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	GK3P	Q14409	553 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	GPR157	Q5UAW9	335 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	ZNF774	Q6NX45	483 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	TBPL2	Q6SJ96	375 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	LINC00114	Q6XXX2	140 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	MBOAT2	Q6ZWT7	520 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	ZER1	Q7Z7L7	766 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	NRM	Q8IXM6	262 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	RNF113B	Q8IZP6	322 aa	Known RBP	11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	SLC7A13	Q8TCU3	470 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	SSMEM1	Q8WWF3	244 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	DYRK2	Q92630	601 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	CENPN	Q96H22	339 aa	Predicted RBP	11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	POM121L2	Q96KW2	1035 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953	SIGLEC11	Q96RL6	698 aa		11.01	□□□□□ -0.65
SNHG17-208	ENST00000456953		A0A087WUU8	490 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	KIR2DS1	A0A191URI9	304 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953		G3V4G9	280 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	OR10H3	O60404	316 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	MELTF	P08582	738 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	IFI30	P13284	250 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	GDI2	P50395	445 aa	Known RBP	11	□□□□□ -0.65
SNHG17-208	ENST00000456953	HMGA2	P52926	109 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	UGT2B15	P54855	530 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	PPP1CB	P62140	327 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	PPP1R8	Q12972	351 aa	Known RBP	11	□□□□□ -0.65
SNHG17-208	ENST00000456953	SEC23B	Q15437	767 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	RFPL4B	Q6ZWI9	263 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	ZDHHC13	Q8IUH4	622 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	PQLC1	Q8N2U9	271 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	LRRC18	Q8N456	261 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	LINC00471	Q8N535	108 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	OR4C15	Q8NGM1	316 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	PFN4	Q8NHR9	129 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	GIPC3	Q8TF64	312 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	SGTB	Q96EQ0	304 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	PLEKHA8	Q96JA3	519 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	ZNF426	Q9BUY5	554 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	KCNN2	Q9H2S1	579 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	VNN3	Q9NY84	501 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	PPP1R3C	Q9UQK1	317 aa		11	□□□□□ -0.65
SNHG17-208	ENST00000456953	LOC100509620	A0A075B734	347 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	HTR3E	A5X5Y0	456 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953		G3V2T6	193 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	RNF13	O43567	381 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	TIMM8A	O60220	97 aa	Predicted RBP	10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	PIP5K1C	O60331	668 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	ICMT	O60725	284 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	CH25H	O95992	272 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	IGHG1	P01857	330 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	HIST1H2AB	P04908	130 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	CSF1	P09603	554 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	RPS2	P15880	293 aa	Known RBP	10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	RBMX	P38159	391 aa	Known RBP	10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	GNB2	P62879	340 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	LAPTM4A	Q15012	233 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	HIST3H3	Q16695	136 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	MICA	Q29983	383 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	HIST3H2A	Q7L7L0	130 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	OR10G2	Q8NGC3	310 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	OR5K1	Q8NHB7	308 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	ABHD4	Q8TB40	342 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	HIST1H2AC	Q93077	130 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	MCHR2	Q969V1	340 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	BPIFA2	Q96DR5	249 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	DCLRE1B	Q9H816	532 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	SIAE	Q9HAT2	523 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	CCNB1IP1	Q9NPC3	277 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	MEPE	Q9NQ76	525 aa	Predicted RBP	10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	TAS2R5	Q9NYW4	299 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	TMEM5	Q9Y2B1	443 aa		10.99	□□□□□ -0.65
SNHG17-208	ENST00000456953	DOCK11	Q5JSL3	2073 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	SAC3D1	A6NKF1	404 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	EFCAB9	A8MZ26	197 aa		10.98	□□□□□ -0.65

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