RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 PDE7BQ9NP56 450 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 DEC1Q9P2X7 70 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 GDF2Q9UK05 429 aaPredicted RBP9.23□□□□□ -0.93
CLIP4-208ENST00000456385 M0R036 132 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 RENP00797 406 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 IFNA6P05013 189 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 CD2P06729 351 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 GPX4P36969 197 aaPredicted RBP9.23□□□□□ -0.93
CLIP4-208ENST00000456385 NPY4RP50391 375 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 DVL1P1P54792 670 aaPredicted RBP9.23□□□□□ -0.93
CLIP4-208ENST00000456385 CD226Q15762 336 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 PTCRAQ6ISU1 281 aaPredicted RBP9.23□□□□□ -0.93
CLIP4-208ENST00000456385 FDX2Q6P4F2 183 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 PRSS54Q6PEW0 395 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 FANCMQ8IYD8 2048 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 HOXB13Q92826 284 aaPredicted RBP9.23□□□□□ -0.93
CLIP4-208ENST00000456385 TMEM230Q96A57 120 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 RAB7BQ96AH8 199 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 TMEM41AQ96HV5 264 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 VSTM2LQ96N03 204 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 OCSTAMPQ9BR26 566 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 C5orf66Q9H5L9 145 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 LYRM4Q9HD34 91 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 GSKIPQ9P0R6 139 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 LOC101059948A0A1B0GTJ6 334 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 A0A1W2PP55 124 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 URADA6NGE7 173 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 ZNF729A6NN14 1252 aaPredicted RBP9.22□□□□□ -0.93
CLIP4-208ENST00000456385 GPR89AB7ZAQ6 455 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 AP4M1O00189 453 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 WRBO00258 174 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 YIF1AO95070 293 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 APBB3O95704 486 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 TXNDC12O95881 172 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 ADH1CP00326 375 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 TIMP1P01033 207 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 CSTBP04080 98 aaKnown RBP9.22□□□□□ -0.93
CLIP4-208ENST00000456385 INHAP05111 366 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 CTSBP07858 339 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 GPR89BP0CG08 455 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 NME1P15531 152 aaKnown RBP9.22□□□□□ -0.93
CLIP4-208ENST00000456385 DNASE1L1P49184 302 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 CSNK1EP49674 416 aaKnown RBP9.22□□□□□ -0.93
CLIP4-208ENST00000456385 GSK3AP49840 483 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 STARD6P59095 220 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 S100A10P60903 97 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 CYCSP99999 105 aaKnown RBP9.22□□□□□ -0.93
CLIP4-208ENST00000456385 UNC119Q13432 240 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 POMZP3Q6PJE2 187 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 FIGLAQ6QHK4 219 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 CLEC18BQ6UXF7 455 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 Q6ZRG5 221 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 ATG4DQ86TL0 474 aaPredicted RBP9.22□□□□□ -0.93
CLIP4-208ENST00000456385 GKN2Q86XP6 184 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 CA13Q8N1Q1 262 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 OR13C3Q8NGS6 347 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 CCL4L1Q8NHW4 92 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 ASB17Q8WXJ9 295 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 FAM3CQ92520 227 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 AQP10Q96PS8 301 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 LMF2Q9BU23 707 aaKnown RBP9.22□□□□□ -0.93
CLIP4-208ENST00000456385 CNTD2Q9H8S5 307 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 FGF22Q9HCT0 170 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 MRPL22Q9NWU5 206 aaKnown RBP9.22□□□□□ -0.93
CLIP4-208ENST00000456385 SLC17A4Q9Y2C5 497 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 AMDHD2Q9Y303 409 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 SPACA6W5XKT8 324 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 TGFBR3LH3BV60 316 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 HCRTR1O43613 425 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 RNF224P0DH78 156 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 CT45A8P0DMV1 189 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 CT45A9P0DMV2 189 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 ZNF10P21506 573 aaPredicted RBP9.22□□□□□ -0.93
CLIP4-208ENST00000456385 MPZP25189 248 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 GLP1RP43220 463 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 HTR5AP47898 357 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 GAB4Q2WGN9 574 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 ANKRD55Q3KP44 614 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 CT45A2Q5DJT8 189 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 PHF19Q5T6S3 580 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 C1QL3Q5VWW1 255 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 OR2A2Q6IF42 318 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 RD3Q7Z3Z2 195 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 HOGA1Q86XE5 327 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 SLC25A43Q8WUT9 341 aaPredicted RBP9.22□□□□□ -0.93
CLIP4-208ENST00000456385 TAAR8Q969N4 342 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 GAS2L1Q99501 681 aaPredicted RBP9.22□□□□□ -0.93
CLIP4-208ENST00000456385 NRSN2Q9GZP1 204 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 RAB33BQ9H082 229 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 EMC9Q9Y3B6 208 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 RHBDD3Q9Y3P4 386 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 LRP12Q9Y561 859 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 DMRT1Q9Y5R6 373 aa9.22□□□□□ -0.93
CLIP4-208ENST00000456385 A0A0A6YYH2 397 aa9.21□□□□□ -0.93
CLIP4-208ENST00000456385 A0A1W2PPE2 198 aa9.21□□□□□ -0.93
CLIP4-208ENST00000456385 METTL21EPA6NDL7 271 aa9.21□□□□□ -0.93
CLIP4-208ENST00000456385 A6NJ64 397 aa9.21□□□□□ -0.93
CLIP4-208ENST00000456385 MPZL1O95297 269 aa9.21□□□□□ -0.93
CLIP4-208ENST00000456385 WISP1O95388 367 aa9.21□□□□□ -0.93
CLIP4-208ENST00000456385 SLC35E2P0CK97 266 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms