RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 ZNF426Q9BUY5 554 aa2.97□□□□□ -1.93
HMGB1P15-201ENST00000453854 TMEM59Q9BXS4 323 aa2.97□□□□□ -1.93
HMGB1P15-201ENST00000453854 ASB8Q9H765 288 aa2.97□□□□□ -1.93
HMGB1P15-201ENST00000453854 HEXA-AS1Q9H8Q6 139 aa2.97□□□□□ -1.93
HMGB1P15-201ENST00000453854 MEPEQ9NQ76 525 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P15-201ENST00000453854 EXOSC3Q9NQT5 275 aaKnown RBP2.97□□□□□ -1.93
HMGB1P15-201ENST00000453854 MCUBQ9NWR8 336 aa2.97□□□□□ -1.93
HMGB1P15-201ENST00000453854 RMND1Q9NWS8 449 aa2.97□□□□□ -1.93
HMGB1P15-201ENST00000453854 CLN6Q9NWW5 311 aa2.97□□□□□ -1.93
HMGB1P15-201ENST00000453854 B4GALT7Q9UBV7 327 aa2.97□□□□□ -1.93
HMGB1P15-201ENST00000453854 WARS2Q9UGM6 360 aaKnown RBP2.97□□□□□ -1.93
HMGB1P15-201ENST00000453854 APOBEC3BQ9UH17 382 aaKnown RBP2.97□□□□□ -1.93
HMGB1P15-201ENST00000453854 DCDC2Q9UHG0 476 aa2.97□□□□□ -1.93
HMGB1P15-201ENST00000453854 LSM7Q9UK45 103 aaKnown RBP2.97□□□□□ -1.93
HMGB1P15-201ENST00000453854 PALLDQ8WX93 1383 aa2.97□□□□□ -1.93
HMGB1P15-201ENST00000453854 KDM3BQ7LBC6 1761 aa2.97□□□□□ -1.93
HMGB1P15-201ENST00000453854 TTC21AQ8NDW8 1320 aa2.96□□□□□ -1.93
HMGB1P15-201ENST00000453854 FANCIQ9NVI1 1328 aa2.96□□□□□ -1.93
HMGB1P15-201ENST00000453854 A0A0J9YWU9 116 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 ANKRD20A5PA0PJZ0 165 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 USP27XA6NNY8 438 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 LYRM9A8MSI8 78 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 A8MX80 341 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 SMLR1H3BR10 107 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 GFYI3L273 518 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 SULT2B1O00204 365 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 PLPP3O14495 311 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 SGCEO43556 437 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 EEDO75530 441 aaKnown RBP2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 LALBAP00709 142 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 IGHV2-5P01817 119 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 OCM2P0CE71 109 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 CDKN2CP42773 168 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 MAGEA6P43360 314 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 GDI2P50395 445 aaKnown RBP2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 XKP51811 444 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 RIPK4P57078 832 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 UBE2MP61081 183 aaKnown RBP2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 ATP6V0D1P61421 351 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 STXBP1P61764 594 aaKnown RBP2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 SLC35B1P78383 322 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 PSG5Q15238 335 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 SLC36A2Q495M3 483 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 DNAL1Q4LDG9 190 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 MEDAGQ5VYS4 303 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 OR52E8Q6IFG1 317 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 FAM173BQ6P4H8 233 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 FAHD1Q6P587 224 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 MBOAT1Q6ZNC8 495 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 PGAP1Q75T13 922 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 TMEM135Q86UB9 458 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 UNC93AQ86WB7 457 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 PLA2G4DQ86XP0 818 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 CCDC112Q8NEF3 446 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 OR2Y1Q8NGV0 311 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 OR5AK3PQ8NH89 298 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 CXorf40AQ8TE69 158 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 PHF10Q8WUB8 498 aaKnown RBP2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 BAALCQ8WXS3 180 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 RORBQ92753 470 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 S100PBPQ96BU1 408 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 HSFY1Q96LI6 401 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 C9orf85Q96MD7 179 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 OR8B4Q96RC9 309 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 SORT1Q99523 831 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 RSG1Q9BU20 258 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 TRIM15Q9C019 465 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 OR51V1Q9H2C8 321 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 C1orf109Q9NX04 203 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 B3GNT2Q9NY97 397 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 CD274Q9NZQ7 290 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 KLK13Q9UKR3 277 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 RALGAPA1Q6GYQ0 2036 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 KIAA0100Q14667 2235 aaKnown RBP2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 TJP1Q07157 1748 aa2.96□□□□□ -1.94
HMGB1P15-201ENST00000453854 MAP3K15Q6ZN16 1313 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 EVC2Q86UK5 1308 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 ZNF831Q5JPB2 1677 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 A0A0A6YYD5 115 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 SAGE2PA6NJ88 616 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 LOC110117498-PIK3R3F6TDL0 507 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 H0YHG0 523 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 FCN1O00602 326 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 GPR171O14626 319 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 NSA2O95478 260 aaKnown RBP2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 LSM8O95777 96 aaKnown RBP2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 TIMP1P01033 207 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 FGGP02679 453 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 HOXD4P09016 255 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 ZNF883P0CG24 379 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 PET100P0DJ07 73 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 MLNP12872 115 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 PVRP15151 417 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 TBPP20226 339 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 BCL3P20749 454 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 ATP6V1B2P21281 511 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 SYT1P21579 422 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 RFC3P40938 356 aa2.95□□□□□ -1.94
HMGB1P15-201ENST00000453854 ACTR1BP42025 376 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms