RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 MRI1Q9BV20 369 aa22.76■■□□□ 1.23
USP42-204ENST00000451154 C1QTNF5Q9BXJ0 243 aa22.76■■□□□ 1.23
USP42-204ENST00000451154 TMEM165Q9HC07 324 aa22.76■■□□□ 1.23
USP42-204ENST00000451154 PKD1L1Q8TDX9 2849 aa22.76■■□□□ 1.23
USP42-204ENST00000451154 A8MXK9 166 aa22.75■■□□□ 1.23
USP42-204ENST00000451154 F5H5P2 479 aa22.75■■□□□ 1.23
USP42-204ENST00000451154 JAZF1Q86VZ6 243 aa22.75■■□□□ 1.23
USP42-204ENST00000451154 MUC20Q8N307 709 aaPredicted RBP22.75■■□□□ 1.23
USP42-204ENST00000451154 OR4K13Q8NH42 304 aa22.75■■□□□ 1.23
USP42-204ENST00000451154 FANK1Q8TC84 345 aa22.75■■□□□ 1.23
USP42-204ENST00000451154 SLC30A2Q9BRI3 323 aa22.75■■□□□ 1.23
USP42-204ENST00000451154 HDHD2Q9H0R4 259 aa22.75■■□□□ 1.23
USP42-204ENST00000451154 MGAM2Q2M2H8 2515 aa22.75■■□□□ 1.23
USP42-204ENST00000451154 IFNL4K9M1U5 179 aa22.74■■□□□ 1.23
USP42-204ENST00000451154 MLNRO43193 412 aa22.74■■□□□ 1.23
USP42-204ENST00000451154 SPRY1O43609 319 aaPredicted RBP22.74■■□□□ 1.23
USP42-204ENST00000451154 HIST1H1CP16403 213 aaKnown RBP22.74■■□□□ 1.23
USP42-204ENST00000451154 CD80P33681 288 aa22.74■■□□□ 1.23
USP42-204ENST00000451154 SRP9P49458 86 aaKnown RBP22.74■■□□□ 1.23
USP42-204ENST00000451154 PRSS12P56730 875 aa22.74■■□□□ 1.23
USP42-204ENST00000451154 SPIBQ01892 262 aa22.74■■□□□ 1.23
USP42-204ENST00000451154 COX10Q12887 443 aa22.74■■□□□ 1.23
USP42-204ENST00000451154 TUSC1Q2TAM9 212 aa22.74■■□□□ 1.23
USP42-204ENST00000451154 PGM2L1Q6PCE3 622 aa22.74■■□□□ 1.23
USP42-204ENST00000451154 MOGAT3Q86VF5 341 aa22.74■■□□□ 1.23
USP42-204ENST00000451154 LINC00346Q8IVM7 164 aa22.74■■□□□ 1.23
USP42-204ENST00000451154 ZMYND19Q96E35 227 aaPredicted RBP22.74■■□□□ 1.23
USP42-204ENST00000451154 PYURFQ96I23 114 aa22.74■■□□□ 1.23
USP42-204ENST00000451154 OR52D1Q9H346 318 aa22.74■■□□□ 1.23
USP42-204ENST00000451154 GORASP2Q9H8Y8 452 aa22.74■■□□□ 1.23
USP42-204ENST00000451154 TMEM100Q9NV29 134 aa22.74■■□□□ 1.23
USP42-204ENST00000451154 OR5V1Q9UGF6 321 aa22.74■■□□□ 1.23
USP42-204ENST00000451154 IQCF6A8MYZ5 107 aa22.73■■□□□ 1.23
USP42-204ENST00000451154 GADD45GO95257 159 aa22.73■■□□□ 1.23
USP42-204ENST00000451154 RENP00797 406 aa22.73■■□□□ 1.23
USP42-204ENST00000451154 HLA-DPB1P04440 258 aa22.73■■□□□ 1.23
USP42-204ENST00000451154 SLC6A6P31641 620 aa22.73■■□□□ 1.23
USP42-204ENST00000451154 SMIM11AP58511 58 aa22.73■■□□□ 1.23
USP42-204ENST00000451154 PAX8Q06710 450 aa22.73■■□□□ 1.23
USP42-204ENST00000451154 CFAP77Q6ZQR2 320 aa22.73■■□□□ 1.23
USP42-204ENST00000451154 DOK3Q7L591 496 aa22.73■■□□□ 1.23
USP42-204ENST00000451154 NAA40Q86UY6 237 aa22.73■■□□□ 1.23
USP42-204ENST00000451154 SLC26A10Q8NG04 563 aa22.73■■□□□ 1.23
USP42-204ENST00000451154 PITX2Q99697 317 aa22.73■■□□□ 1.23
USP42-204ENST00000451154 IFT27Q9BW83 186 aa22.73■■□□□ 1.23
USP42-204ENST00000451154 MED4Q9NPJ6 270 aa22.73■■□□□ 1.23
USP42-204ENST00000451154 RPRD1BQ9NQG5 326 aaKnown RBP22.73■■□□□ 1.23
USP42-204ENST00000451154 F5H5K5 113 aa22.72■■□□□ 1.23
USP42-204ENST00000451154 ARPC3O15145 178 aa22.72■■□□□ 1.23
USP42-204ENST00000451154 SEMG1P04279 462 aa22.72■■□□□ 1.23
USP42-204ENST00000451154 PRDX6P30041 224 aa22.72■■□□□ 1.23
USP42-204ENST00000451154 MSX2P35548 267 aaPredicted RBP22.72■■□□□ 1.23
USP42-204ENST00000451154 PMELP40967 661 aa22.72■■□□□ 1.23
USP42-204ENST00000451154 FAM201AQ5SY85 155 aa22.72■■□□□ 1.23
USP42-204ENST00000451154 SLC18B1Q6NT16 456 aa22.72■■□□□ 1.23
USP42-204ENST00000451154 COLCA1Q6ZS62 124 aa22.72■■□□□ 1.23
USP42-204ENST00000451154 SGMS2Q8NHU3 365 aa22.72■■□□□ 1.23
USP42-204ENST00000451154 CDADC1Q9BWV3 514 aa22.72■■□□□ 1.23
USP42-204ENST00000451154 SSBP3Q9BWW4 388 aaPredicted RBP22.72■■□□□ 1.23
USP42-204ENST00000451154 HCAR1Q9BXC0 346 aa22.72■■□□□ 1.23
USP42-204ENST00000451154 FN3KQ9H479 309 aa22.72■■□□□ 1.23
USP42-204ENST00000451154 LRCH1Q9Y2L9 728 aa22.72■■□□□ 1.23
USP42-204ENST00000451154 ACSM4P0C7M7 580 aa22.71■■□□□ 1.23
USP42-204ENST00000451154 RPS2P15880 293 aaKnown RBP22.71■■□□□ 1.23
USP42-204ENST00000451154 SELEP16581 610 aa22.71■■□□□ 1.23
USP42-204ENST00000451154 PRTN3P24158 256 aa22.71■■□□□ 1.23
USP42-204ENST00000451154 KRTAP27-1Q3LI81 207 aa22.71■■□□□ 1.23
USP42-204ENST00000451154 KLBQ86Z14 1044 aa22.71■■□□□ 1.23
USP42-204ENST00000451154 ZNF48Q96MX3 618 aaPredicted RBP22.71■■□□□ 1.23
USP42-204ENST00000451154 TMEM246Q9BRR3 403 aa22.71■■□□□ 1.23
USP42-204ENST00000451154 PCDHGB1Q9Y5G3 927 aa22.71■■□□□ 1.23
USP42-204ENST00000451154 IGHV3OR16-10A0A075B7F0 116 aa22.7■■□□□ 1.22
USP42-204ENST00000451154 OR6C68A6NDL8 312 aa22.7■■□□□ 1.22
USP42-204ENST00000451154 OR10H3O60404 316 aa22.7■■□□□ 1.22
USP42-204ENST00000451154 HLA-DQA2P01906 255 aa22.7■■□□□ 1.22
USP42-204ENST00000451154 FPR3P25089 353 aa22.7■■□□□ 1.22
USP42-204ENST00000451154 NOS3P29474 1203 aa22.7■■□□□ 1.22
USP42-204ENST00000451154 PAX2Q02962 417 aa22.7■■□□□ 1.22
USP42-204ENST00000451154 BAMBIQ13145 260 aa22.7■■□□□ 1.22
USP42-204ENST00000451154 ZBTB46Q86UZ6 589 aa22.7■■□□□ 1.22
USP42-204ENST00000451154 OR52E2Q8NGJ4 325 aa22.7■■□□□ 1.22
USP42-204ENST00000451154 OR2AJ1Q8NGZ0 328 aa22.7■■□□□ 1.22
USP42-204ENST00000451154 C1orf147Q96MC9 270 aaPredicted RBP22.7■■□□□ 1.22
USP42-204ENST00000451154 FAM107BQ9H098 131 aa22.7■■□□□ 1.22
USP42-204ENST00000451154 MIOXQ9UGB7 285 aa22.7■■□□□ 1.22
USP42-204ENST00000451154 SOX21Q9Y651 276 aaPredicted RBP22.7■■□□□ 1.22
USP42-204ENST00000451154 DNAJC9-AS1A6NH13 148 aa22.69■■□□□ 1.22
USP42-204ENST00000451154 LCATP04180 440 aa22.69■■□□□ 1.22
USP42-204ENST00000451154 IGHV4-38-2P0DP08 117 aa22.69■■□□□ 1.22
USP42-204ENST00000451154 HKR1P10072 659 aa22.69■■□□□ 1.22
USP42-204ENST00000451154 GNB2P62879 340 aa22.69■■□□□ 1.22
USP42-204ENST00000451154 GK2Q14410 553 aaPredicted RBP22.69■■□□□ 1.22
USP42-204ENST00000451154 SLC36A3Q495N2 470 aa22.69■■□□□ 1.22
USP42-204ENST00000451154 SLC35F1Q5T1Q4 408 aa22.69■■□□□ 1.22
USP42-204ENST00000451154 SDR9C7Q8NEX9 313 aa22.69■■□□□ 1.22
USP42-204ENST00000451154 ATF6BQ99941 703 aa22.69■■□□□ 1.22
USP42-204ENST00000451154 MS4A7Q9GZW8 240 aaPredicted RBP22.69■■□□□ 1.22
USP42-204ENST00000451154 CYB5R1Q9UHQ9 305 aa22.69■■□□□ 1.22
USP42-204ENST00000451154 LRRC30A6NM36 301 aa22.68■■□□□ 1.22
USP42-204ENST00000451154 GGT2P36268 569 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms