RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 FAM87AP0C7U9 286 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 EPXP11678 715 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 ATF1P18846 271 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 APEX1P27695 318 aaKnown RBP7.27□□□□□ -1.25
NECAP1-202ENST00000450991 SOX2P48431 317 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 MMP16P51512 607 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 HIST1H3AP68431 136 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 ODF4Q2M2E3 257 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 HIST2H3PS2Q5TEC6 136 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 STAC2Q6ZMT1 411 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 HIST2H3AQ71DI3 136 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 LINGO2Q7L985 606 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 AAED1Q7RTV5 226 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 LYSMD2Q8IV50 215 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 CHPT1Q8WUD6 406 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 ZNF837Q96EG3 531 aaPredicted RBP7.27□□□□□ -1.25
NECAP1-202ENST00000450991 DIRAS2Q96HU8 199 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 CCDC32Q9BV29 185 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 SRRQ9GZT4 340 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 SLC25A18Q9H1K4 315 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 PAQR5Q9NXK6 330 aaPredicted RBP7.27□□□□□ -1.25
NECAP1-202ENST00000450991 MBD2Q9UBB5 411 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 DAPK2Q9UIK4 370 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 OR52A1Q9UKL2 312 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 LHX6Q9UPM6 363 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 POLR1DQ9Y2S0 133 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 AK6Q9Y3D8 172 aaKnown RBP7.27□□□□□ -1.25
NECAP1-202ENST00000450991 TMEM269A0A1B0GVZ9 245 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 TBX1O43435 398 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 ECDO95905 644 aaPredicted RBP7.27□□□□□ -1.25
NECAP1-202ENST00000450991 TGM6O95932 706 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 SLC2A2P11168 524 aaPredicted RBP7.27□□□□□ -1.25
NECAP1-202ENST00000450991 ADRA2CP18825 462 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 EVX1P49640 407 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 ZNF84P51523 738 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 TMPRSS3P57727 454 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 MRPS34P82930 218 aaKnown RBP7.27□□□□□ -1.25
NECAP1-202ENST00000450991 SGCAQ16586 387 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 RGS21Q2M5E4 152 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 Q6ZNX1 250 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 CHMP1BQ7LBR1 199 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 LRRTM1Q86UE6 522 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.27□□□□□ -1.25
NECAP1-202ENST00000450991 TUSC5Q8IXB3 177 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 THRSPQ92748 146 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 TMEM106AQ96A25 262 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 ALKBH3Q96Q83 286 aaPredicted RBP7.27□□□□□ -1.25
NECAP1-202ENST00000450991 RBM24Q9BX46 236 aaKnown RBP7.27□□□□□ -1.25
NECAP1-202ENST00000450991 RNF122Q9H9V4 155 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 CALHM2Q9HA72 323 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 ABCB10Q9NRK6 738 aa7.27□□□□□ -1.25
NECAP1-202ENST00000450991 MCTS1Q9ULC4 181 aaKnown RBP7.27□□□□□ -1.25
NECAP1-202ENST00000450991 CACNA1AO00555 2505 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 DSPP15924 2871 aaKnown RBP7.26□□□□□ -1.25
NECAP1-202ENST00000450991 SVILO95425 2214 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 TRAV8-7A0A075B6U6 113 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 PDCD5O14737 125 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 RER1O15258 196 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 SLC19A2O60779 497 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 IGHG3P01860 377 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 CPN1P15169 458 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 ELK1P19419 428 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 ACHEP22303 614 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 PSMA6P60900 246 aaKnown RBP7.26□□□□□ -1.25
NECAP1-202ENST00000450991 GFOD2Q3B7J2 385 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 RIPPLY2Q5TAB7 128 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 STEAP3Q658P3 488 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 ASPHD2Q6ICH7 369 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 CNIH2Q6PI25 160 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 KLHL24Q6TFL4 600 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 METAP1DQ6UB28 335 aaPredicted RBP7.26□□□□□ -1.25
NECAP1-202ENST00000450991 DCDC5Q6ZRR9 648 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 SIAH3Q8IW03 269 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 CPT1CQ8TCG5 803 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 ASB5Q8WWX0 329 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 NIPAL2Q9H841 368 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 DDX28Q9NUL7 540 aaKnown RBP7.26□□□□□ -1.25
NECAP1-202ENST00000450991 ABRACLQ9P1F3 81 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 MALT1Q9UDY8 824 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 ISPDA4D126 451 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 FABP12A6NFH5 140 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 H3BSH0 61 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 TMEM127O75204 238 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 TTRP02766 147 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 TMEM11P17152 192 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 CTSSP25774 331 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 PTBP1P26599 531 aaKnown RBP eCLIP7.26□□□□□ -1.258e-7■■■■■ 27.6
NECAP1-202ENST00000450991 GUCA1AP43080 201 aaPredicted RBP7.26□□□□□ -1.25
NECAP1-202ENST00000450991 RIN1Q13671 783 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 BCL2L15Q5TBC7 163 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 FAM27BQ5VT28 67 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 C11orf88Q6PI97 169 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 XKRXQ6PP77 449 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 FAM131AQ6UXB0 335 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 ELMOD2Q8IZ81 293 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 CENPSQ8N2Z9 138 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 GPR137CQ8N3F9 429 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 OR5H6Q8NGV6 325 aa7.26□□□□□ -1.25
NECAP1-202ENST00000450991 TRMT10AQ8TBZ6 339 aaKnown RBP7.26□□□□□ -1.25
NECAP1-202ENST00000450991 TSEN15Q8WW01 171 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms