RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 AKR7LQ8NHP1 331 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 SPTSSAQ969W0 71 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 DOK1Q99704 481 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 BCL7BQ9BQE9 202 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 FAM192AQ9GZU8 254 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 G6PC2Q9NQR9 355 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 NUFIP1Q9UHK0 495 aaKnown RBP16.78■□□□□ 0.28
RPS28-202ENST00000449223 AMDHD2Q9Y303 409 aa16.78■□□□□ 0.28
RPS28-202ENST00000449223 TRBV2A0A0J9YWF9 115 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 TMEM269A0A1B0GVZ9 245 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 TMEM212A6NML5 194 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 M0R135 149 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 LRRTM2O43300 516 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 GABARAPO95166 117 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 SERPINA5P05154 406 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 ZNF14P17017 642 aaPredicted RBP16.77■□□□□ 0.28
RPS28-202ENST00000449223 IL32P24001 234 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 HTR5AP47898 357 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 UQCRFS1P47985 274 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 GDI2P50395 445 aaKnown RBP16.77■□□□□ 0.28
RPS28-202ENST00000449223 TMBIM6P55061 237 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 MFGE8Q08431 387 aaPredicted RBP16.77■□□□□ 0.28
RPS28-202ENST00000449223 TRAM1Q15629 374 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 TSC22D1Q15714 1073 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 IGFBP7Q16270 282 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 TIMM50Q3ZCQ8 353 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 WDR38Q5JTN6 314 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 DRAM2Q6UX65 266 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 SLC16A12Q6ZSM3 486 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 SSX8Q7RTT4 187 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 MDP1Q86V88 176 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 MS4A15Q8N5U1 240 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 LILRB4Q8NHJ6 448 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 ZNF799Q96GE5 643 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 CRNNQ9UBG3 495 aaPredicted RBP16.77■□□□□ 0.28
RPS28-202ENST00000449223 ENPP5Q9UJA9 477 aa16.77■□□□□ 0.28
RPS28-202ENST00000449223 RTTNQ86VV8 2226 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 LOC110117498-PIK3R3F6TDL0 507 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 H3BSA7 217 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 SC5DO75845 299 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 ZFPL1O95159 310 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 PRB1P04280 392 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 CBR1P16152 277 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 CCKARP32238 428 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 KIR3DL2P43630 455 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 CX3CR1P49238 355 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 PLP2Q04941 152 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 GPR107Q5VW38 600 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 ARL9Q6T311 187 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 GDPGP1Q6ZNW5 385 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 RAB2BQ8WUD1 216 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 GHSRQ92847 366 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 DCLRE1CQ96SD1 692 aaKnown RBP16.76■□□□□ 0.27
RPS28-202ENST00000449223 ERRFI1Q9UJM3 462 aaPredicted RBP16.76■□□□□ 0.27
RPS28-202ENST00000449223 OR52A1Q9UKL2 312 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 SLC25A15Q9Y619 301 aa16.76■□□□□ 0.27
RPS28-202ENST00000449223 IQCMA0A1B0GVH7 501 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 ISG15P05161 165 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 ACSM4P0C7M7 580 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 AGAP20933 346 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 UGT2B10P36537 528 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 CRYBB2P43320 205 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 TPTEP56180 551 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 ZNF121P58317 390 aaPredicted RBP16.75■□□□□ 0.27
RPS28-202ENST00000449223 TUBA1BP68363 451 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 FAM27E3Q08E93 113 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 C3orf36Q3SXR2 165 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 FOXB2Q5VYV0 432 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 TUBA1AQ71U36 451 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 CLVS1Q8IUQ0 354 aaPredicted RBP16.75■□□□□ 0.27
RPS28-202ENST00000449223 ELMOD2Q8IZ81 293 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 PRR7Q8TB68 274 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 S100PBPQ96BU1 408 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 POM121L2Q96KW2 1035 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 ZNF281Q9Y2X9 895 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 CHD6Q8TD26 2715 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 FAM208BQ5VWN6 2430 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 PNMA8CA0A1B0GUJ8 204 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 C16orf97H3BN30 126 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 ICMTO60725 284 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 IGLV1-44P01699 117 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 HLA-DPB1P04440 258 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 DBHP09172 617 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 GADD45AP24522 165 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 STOMP27105 288 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 PRKXP51817 358 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 RPS11P62280 158 aaKnown RBP eCLIP16.75■□□□□ 0.27
RPS28-202ENST00000449223 RPS25P62851 125 aaKnown RBP16.75■□□□□ 0.27
RPS28-202ENST00000449223 GALK2Q01415 458 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 CTF1Q16619 201 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 YIF1BQ5BJH7 314 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 COLCA1Q6ZS62 124 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 ZNF283Q8N7M2 679 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 OR5AK2Q8NH90 309 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 ISOC1Q96CN7 298 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 DGCR14Q96DF8 476 aaKnown RBP16.75■□□□□ 0.27
RPS28-202ENST00000449223 PDCD1LG2Q9BQ51 273 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 STUB1Q9UNE7 303 aa16.75■□□□□ 0.27
RPS28-202ENST00000449223 DIDO1Q9BTC0 2240 aaKnown RBP16.74■□□□□ 0.27
RPS28-202ENST00000449223 LOC100509620A0A075B734 347 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms