RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 RIN1Q13671 783 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 OCLNQ16625 522 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 DNM1P34Q6PK57 102 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 ZNF813Q6ZN06 617 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 FOXL2NBQ6ZUU3 175 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 MEPCEQ7L2J0 689 aaKnown RBP11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 ZNF627Q7L945 461 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 MDP1Q86V88 176 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 GLB1L2Q8IW92 636 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 ZCCHC24Q8N2G6 241 aaKnown RBP11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 LRRC18Q8N456 261 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 FGFBP3Q8TAT2 258 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 FNDC8Q8TC99 324 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 TRUB1Q8WWH5 349 aaKnown RBP11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 C1orf159Q96HA4 380 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 SH3GL3Q99963 347 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 MS4A5Q9H3V2 200 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 POLE4Q9NR33 117 aa11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 H2AFY2Q9P0M6 372 aaPredicted RBP11.8□□□□□ -0.52
PDLIM2-213ENST00000448520 PRODHO43272 600 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 DENRO43583 198 aaKnown RBP11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 TCF21O43680 179 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 SYNGR3O43761 229 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 XPNPEP2O43895 674 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 MPZL2O60487 215 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 ADRA2AP08913 450 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 NR2C1P13056 603 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 GLRXP35754 106 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 SRP14P37108 136 aaKnown RBP11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 HCCSP53701 268 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 CDH15P55291 814 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 TEKQ02763 1124 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 ZNF91Q05481 1191 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 SNTB2Q13425 540 aaKnown RBP11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 ENDOGQ14249 297 aaKnown RBP11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 GSG1Q2KHT4 349 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 MYPOPQ86VE0 399 aaPredicted RBP11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 LINC00346Q8IVM7 164 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 SKA3Q8IX90 412 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 SGCDQ92629 289 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 MRPL24Q96A35 216 aaKnown RBP11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 TEAD3Q99594 435 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 SOX7Q9BT81 388 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 NOX3Q9HBY0 568 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 FBXL3Q9UKT7 428 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 LRRC42Q9Y546 428 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 COMMD3-BMI1R4GMX3 469 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 HSPE1-MOB4S4R3N1 261 aa11.79□□□□□ -0.52
PDLIM2-213ENST00000448520 DBTP11182 482 aaKnown RBP11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 CD79AP11912 226 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 ZNF35P13682 527 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 MSR1P21757 451 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 HTR1FP30939 366 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 DVL1P1P54792 670 aaPredicted RBP11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 MRPS34P82930 218 aaKnown RBP11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 HSF2Q03933 536 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 GLO1Q04760 184 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 SLC25A30Q5SVS4 291 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 C6orf141Q5SZD1 244 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 KRT80Q6KB66 452 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 CORO6Q6QEF8 472 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 ERI1Q8IV48 349 aaKnown RBP11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 GID4Q8IVV7 300 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 SLC22A24Q8N4F4 322 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 BPIFB6Q8NFQ5 453 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 RNFT2Q96EX2 444 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 ZNF416Q9BWM5 594 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 TTTY10Q9BZA0 68 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 Q9H521 79 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 ADGRL4Q9HBW9 690 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 ZNF224Q9NZL3 707 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 KLHDC2Q9Y2U9 406 aa11.78□□□□□ -0.52
PDLIM2-213ENST00000448520 A0A0A6YYJ9 748 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 B4DSR2 109 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 M0R233 179 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 FAM20BO75063 409 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 HLA-HP01893 362 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 SPARCP09486 303 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 ZNF14P17017 642 aaPredicted RBP11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 TMEM33P57088 247 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 RPS23P62266 143 aaKnown RBP11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 SRSF2Q01130 221 aaKnown RBP11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 GALK2Q01415 458 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 PIGFQ07326 219 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 SLC35D3Q5M8T2 416 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 LCN1P1Q5VSP4 162 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 MEDAGQ5VYS4 303 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 TIGD4Q8IY51 512 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 OR51G2Q8NGK0 314 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 OR6N2Q8NGY6 317 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 LGALS12Q96DT0 336 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 ZNF75AQ96N20 296 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 INTS14Q96SY0 518 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 TBX5Q99593 518 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 MARCH7Q9H992 704 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 WARS2Q9UGM6 360 aaKnown RBP11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 METRNQ9UJH8 293 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 POLR1DQ9Y2S0 133 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 LHFPL6Q9Y693 200 aa11.77□□□□□ -0.53
PDLIM2-213ENST00000448520 SLC22A31A6NKX4 558 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms