RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 RGS6P49758 472 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 CCNIQ14094 377 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 GINS1Q14691 196 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 FAM166AQ6J272 317 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 Q6ZR03 302 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 COLCA1Q6ZS62 124 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 OR5L1Q8NGL2 311 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 UTP4Q969X6 686 aaKnown RBP10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 ATF6BQ99941 703 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 HCAR1Q9BXC0 346 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 NARFLQ9H6Q4 476 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 MED20Q9H944 212 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 ZNF556Q9HAH1 456 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 SAP30LQ9HAJ7 183 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 CMC2Q9NRP2 79 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 COMMD3-BMI1R4GMX3 469 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 FAM183AA6NL82 134 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 ZNF593O00488 134 aaPredicted RBP10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 CD55P08174 381 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 OSMP13725 252 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 ANXA8P13928 327 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 ZNF3P17036 446 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 PCK2Q16822 640 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 HFEQ30201 348 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 ZMAT1Q5H9K5 638 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 TEX30Q5JUR7 227 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 LINC01590Q5TEZ4 76 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 SLC27A4Q6P1M0 643 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 SHQ1Q6PI26 577 aaKnown RBP10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 FBXW12Q6X9E4 464 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 CLDND2Q8NHS1 167 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 C1orf159Q96HA4 380 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 DIRC2Q96SL1 478 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 C1QTNF5Q9BXJ0 243 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 EGLN1Q9GZT9 426 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 MMADHCQ9H3L0 296 aaPredicted RBP10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 TMEM160Q9NX00 188 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 TREM2Q9NZC2 230 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 SONP18583 2426 aaKnown RBP10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 ABCA2Q9BZC7 2435 aa10.81□□□□□ -0.68
PRPF40A-203ENST00000448428 KIAA1324LA8MWY0 1029 aaPredicted RBP10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 DEAF1O75398 565 aaPredicted RBP10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 LCATP04180 440 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 SPARCP09486 303 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 IGFBP5P24593 272 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 ENTPD1P49961 510 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 LMO4P61968 165 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 TNFAIP6P98066 277 aaPredicted RBP10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 CDK5Q00535 292 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 MVKQ03426 396 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 CHRFAM7AQ494W8 412 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 AVPI1Q5T686 147 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 TMEM236Q5W0B7 351 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 OR2T2Q6IF00 324 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 DCXRQ7Z4W1 244 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 OR5AS1Q8N127 324 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 LINC01356Q8N9X3 169 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 ATG16L2Q8NAA4 619 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 OR2Z1Q8NG97 314 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 OR6K6Q8NGW6 343 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 CCL17Q92583 94 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 OTULINQ96BN8 352 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 NRBF2Q96F24 287 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 ELMOD3Q96FG2 381 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 KCNS2Q9ULS6 477 aa10.8□□□□□ -0.68
PRPF40A-203ENST00000448428 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.8□□□□□ -0.682e-8■■■■■ 69.7
PRPF40A-203ENST00000448428 M0R135 149 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 SURF4O15260 269 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 HMGN1P05114 100 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 RBMXP38159 391 aaKnown RBP10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 DAPP51397 102 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 BLVRAP53004 296 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 CDH15P55291 814 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 TPTEP56180 551 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 PRSS12P56730 875 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 HNRNPA0Q13151 305 aaKnown RBP10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 GK2Q14410 553 aaPredicted RBP10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 C1orf146Q5VVC0 180 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 PLBD1Q6P4A8 553 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 OR8G5Q8NG78 346 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 ST7LQ8TDW4 575 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 SPTSSAQ969W0 71 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 ZNF799Q96GE5 643 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 BEX2Q9BXY8 128 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 CENPMQ9NSP4 180 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 DDX28Q9NUL7 540 aaKnown RBP10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 CDC42EP3Q9UKI2 254 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 WIPI2Q9Y4P8 454 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 AP4S1Q9Y587 144 aa10.79□□□□□ -0.68
PRPF40A-203ENST00000448428 C5orf63A6NC05 138 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 IQCF6A8MYZ5 107 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 FAM157AC9JC47 383 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 CLDN25C9JDP6 229 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 PRR23D1E9PI22 279 aaPredicted RBP10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 H0YL77 283 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 GLCEO94923 617 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 PRR23D2P0DMB1 279 aaPredicted RBP10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 ANOS1P23352 680 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 TNFSF4P23510 183 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 GSTT1P30711 240 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms