RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 RPS4Y2Q8TD47 263 aa2.53□□□□□ -2
PMS1-215ENST00000447232 ST8SIA4Q92187 359 aa2.53□□□□□ -2
PMS1-215ENST00000447232 ERGIC1Q969X5 290 aa2.53□□□□□ -2
PMS1-215ENST00000447232 SLC25A36Q96CQ1 311 aa2.53□□□□□ -2
PMS1-215ENST00000447232 TRIM36Q9NQ86 728 aa2.53□□□□□ -2
PMS1-215ENST00000447232 TUBG2Q9NRH3 451 aa2.53□□□□□ -2
PMS1-215ENST00000447232 CPSF2Q9P2I0 782 aaKnown RBP2.53□□□□□ -2
PMS1-215ENST00000447232 PRDM4Q9UKN5 801 aa2.53□□□□□ -2
PMS1-215ENST00000447232 COX11Q9Y6N1 276 aa2.53□□□□□ -2
PMS1-215ENST00000447232 B5MCH6 92 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 F5H5P2 479 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 RTL8CO15255 209 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 AHSA1O95433 338 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 DUX4L4P0CJ87 422 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 IRF2P14316 349 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 EFNA1P20827 205 aaPredicted RBP2.53□□□□□ -2.01
PMS1-215ENST00000447232 GSTM3P21266 225 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 CSNK1A1P48729 337 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 GDI2P50395 445 aaKnown RBP2.53□□□□□ -2.01
PMS1-215ENST00000447232 ARHGDIAP52565 204 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 HSF2Q03933 536 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 BTKQ06187 659 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 MAB21L1Q13394 359 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 TP53BP2Q13625 1128 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 FLG2Q5D862 2391 aaPredicted RBP2.53□□□□□ -2.01
PMS1-215ENST00000447232 KRTAP5-4Q6L8H1 288 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 H1FNTQ75WM6 255 aaPredicted RBP2.53□□□□□ -2.01
PMS1-215ENST00000447232 ZNF429Q86V71 674 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 FAM90A1Q86YD7 464 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 NPEPL1Q8NDH3 523 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 VPS37AQ8NEZ2 397 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 OR13G1Q8NGZ3 307 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 OR4Q3Q8NH05 313 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 OR8U1Q8NH10 309 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 ST6GALNAC6Q969X2 333 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 CMBLQ96DG6 245 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 PHF21BQ96EK2 531 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 SLC41A3Q96GZ6 507 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 C4orf45Q96LM5 186 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 C18orf15Q96N68 181 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 NEU1Q99519 415 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 ATF6BQ99941 703 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 FAM110AQ9BQ89 295 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 ELOVL3Q9HB03 270 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 POLE3Q9NRF9 147 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.53□□□□□ -2.01
PMS1-215ENST00000447232 LMBRD1Q9NUN5 540 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 GLTPQ9NZD2 209 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 POLR3HQ9Y535 204 aaPredicted RBP2.53□□□□□ -2.01
PMS1-215ENST00000447232 CAPN7Q9Y6W3 813 aa2.53□□□□□ -2.01
PMS1-215ENST00000447232 TRAV38-1A0A0B4J264 116 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 PSMB11A5LHX3 300 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 CXorf65A6NEN9 183 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 CFAP73A6NFT4 308 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 OOEPA6NGQ2 149 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 UNC119BA6NIH7 251 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 MARCH11A6NNE9 402 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 FAM90A22PA8MWA6 464 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 BRI3O95415 125 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 GASTP01350 101 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 FGGP02679 453 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 GYPAP02724 150 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 LPLP06858 475 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 SNRPAP09012 282 aaKnown RBP2.52□□□□□ -2.01
PMS1-215ENST00000447232 INAFM2P0DMQ5 153 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 G6PDP11413 515 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 CRABP2P29373 138 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 GRPRP30550 384 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 CXCR5P32302 372 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 RPS5P46782 204 aaKnown RBP2.52□□□□□ -2.01
PMS1-215ENST00000447232 FUT5Q11128 374 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 KIR2DS1Q14954 304 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 KIAA0040Q15053 153 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 DEFB136Q30KP8 78 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 CNGA4Q8IV77 575 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 OR8G5Q8NG78 346 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 OR11L1Q8NGX0 322 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 PPCDCQ96CD2 204 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 ZNF583Q96ND8 569 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 CPNE1Q99829 537 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 REEP4Q9H6H4 257 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 EMC7Q9NPA0 242 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 PRPF19Q9UMS4 504 aaKnown RBP2.52□□□□□ -2.01
PMS1-215ENST00000447232 DUXAA6NLW8 204 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 ZNF726A6NNF4 738 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 SPDEFO95238 335 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 PTBP3O95758 552 aaKnown RBP2.52□□□□□ -2.01
PMS1-215ENST00000447232 AMY1AP04745 511 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 EGR2P11161 476 aaPredicted RBP2.52□□□□□ -2.01
PMS1-215ENST00000447232 UQCRBP14927 111 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 ZNF32P17041 273 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 AZGP1P25311 298 aaKnown RBP2.52□□□□□ -2.01
PMS1-215ENST00000447232 CD200P41217 278 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 OR3A4PP47883 348 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 PSG4Q00888 419 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 PMS2P11Q13670 270 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 TAF11Q15544 211 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 MPPED2Q15777 294 aa2.52□□□□□ -2.01
PMS1-215ENST00000447232 SRSF7Q16629 238 aaKnown RBP eCLIP2.52□□□□□ -2.01
PMS1-215ENST00000447232 FAM83EQ2M2I3 478 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms