RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TANC2Q9HCD6 1990 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 PLSCR5A0PG75 271 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 C5orf63A6NC05 138 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 SELENOFO60613 162 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 GLCEO94923 617 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 HMGN1P05114 100 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 RGS6P49758 472 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 PTGES3Q15185 160 aaKnown RBP12.63□□□□□ -0.39
HDAC4-204ENST00000446876 TRIP10Q15642 601 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 SNAPC1Q16533 368 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 MOGQ16653 247 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 PCK2Q16822 640 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 TMEM249Q2WGJ8 235 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 KDM4DQ6B0I6 523 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 C1orf174Q8IYL3 243 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 OR5AS1Q8N127 324 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 ST7LQ8TDW4 575 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 APOBEC3DQ96AK3 386 aaPredicted RBP12.63□□□□□ -0.39
HDAC4-204ENST00000446876 SLAMF6Q96DU3 332 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 CENPNQ96H22 339 aaPredicted RBP12.63□□□□□ -0.39
HDAC4-204ENST00000446876 PLEKHA8Q96JA3 519 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 INTS14Q96SY0 518 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 CENPMQ9NSP4 180 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 TMEFF2Q9UIK5 374 aaPredicted RBP12.63□□□□□ -0.39
HDAC4-204ENST00000446876 CACNG2Q9Y698 323 aa12.63□□□□□ -0.39
HDAC4-204ENST00000446876 FN1P02751 2386 aaKnown RBP12.63□□□□□ -0.39
HDAC4-204ENST00000446876 LRP5LA4QPB2 252 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 M0R135 149 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 TPD52L2O43399 206 aaKnown RBP12.62□□□□□ -0.39
HDAC4-204ENST00000446876 MT-ND5P03915 603 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 LCATP04180 440 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 KITLGP21583 273 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 GIFP27352 417 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 RBMXP38159 391 aaKnown RBP12.62□□□□□ -0.39
HDAC4-204ENST00000446876 NAA10P41227 235 aaPredicted RBP12.62□□□□□ -0.39
HDAC4-204ENST00000446876 ECH1Q13011 328 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 RIN1Q13671 783 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 EIF2B1Q14232 305 aaKnown RBP12.62□□□□□ -0.39
HDAC4-204ENST00000446876 OR2T2Q6IF00 324 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 Q6ZR03 302 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 CXXC5Q7LFL8 322 aaKnown RBP12.62□□□□□ -0.39
HDAC4-204ENST00000446876 DPY19L4Q7Z388 723 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 RDH5Q92781 318 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 ZNF799Q96GE5 643 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 AMELYQ99218 206 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 CIB1Q99828 191 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 COPS4Q9BT78 406 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 C1QTNF5Q9BXJ0 243 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 MARCH7Q9H992 704 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 ZNF275Q9NSD4 429 aaPredicted RBP12.62□□□□□ -0.39
HDAC4-204ENST00000446876 DDX28Q9NUL7 540 aaKnown RBP12.62□□□□□ -0.39
HDAC4-204ENST00000446876 ABCA2Q9BZC7 2435 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 ANK3Q12955 4377 aaKnown RBP12.62□□□□□ -0.39
HDAC4-204ENST00000446876 C2CD3Q4AC94 2353 aa12.62□□□□□ -0.39
HDAC4-204ENST00000446876 ZFHX3Q15911 3703 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 SETD2Q9BYW2 2564 aaPredicted RBP12.61□□□□□ -0.39
HDAC4-204ENST00000446876 INAFM1C9JVW0 142 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 PRKYO43930 277 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 RP2O75695 350 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 SLC2A1P11166 492 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 ZNF16P17020 682 aaPredicted RBP12.61□□□□□ -0.39
HDAC4-204ENST00000446876 ACHEP22303 614 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 SLC2A5P22732 501 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 IGFBP5P24593 272 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 SLC6A9P48067 706 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 PRKXP51817 358 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 BLVRAP53004 296 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 TPTEP56180 551 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 RPS7P62081 194 aaKnown RBP12.61□□□□□ -0.39
HDAC4-204ENST00000446876 ESRRGP62508 458 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 APOFQ13790 326 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 PCGF3Q3KNV8 242 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 SNAI3Q3KNW1 292 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 TEX30Q5JUR7 227 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 FBXW12Q6X9E4 464 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 COLCA1Q6ZS62 124 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 USP51Q70EK9 711 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 BCDIN3DQ7Z5W3 292 aaKnown RBP12.61□□□□□ -0.39
HDAC4-204ENST00000446876 TIGD4Q8IY51 512 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 OR5L1Q8NGL2 311 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 SPTSSAQ969W0 71 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 HAVCR1Q96D42 359 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 COG8Q96MW5 612 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 ABHD6Q9BV23 337 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 TEX12Q9BXU0 123 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 NARFLQ9H6Q4 476 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 CHODLQ9H9P2 273 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 SAP30LQ9HAJ7 183 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 DECR2Q9NUI1 292 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 NKIRAS2Q9NYR9 191 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 TREM2Q9NZC2 230 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 N6AMT1Q9Y5N5 214 aa12.61□□□□□ -0.39
HDAC4-204ENST00000446876 NSD1Q96L73 2696 aaPredicted RBP12.61□□□□□ -0.39
HDAC4-204ENST00000446876 CCDC182A6NF36 153 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 ZAR1LA6NP61 321 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 ZNF878C9JN71 531 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 J3QW42 95 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 WNT9BO14905 357 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 PRODHO43272 600 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 CD5LO43866 347 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms