RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 ELMOD3Q96FG2 381 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 COG8Q96MW5 612 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 ATF6BQ99941 703 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 NMNAT2Q9BZQ4 307 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 EGLN1Q9GZT9 426 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 MED20Q9H944 212 aa12.52□□□□□ -0.41
USE1-202ENST00000445667 CGGBP1Q9UFW8 167 aaPredicted RBP12.52□□□□□ -0.41
USE1-202ENST00000445667 ARRDC5A6NEK1 342 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 FAM157AC9JC47 383 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 IFNGP01579 166 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 CD55P08174 381 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 ACSM4P0C7M7 580 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 RAC2P15153 192 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 SPI1P17947 270 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 FMO3P31513 532 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 CDH15P55291 814 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 PRSS12P56730 875 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 LMO4P61968 165 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 TNFAIP6P98066 277 aaPredicted RBP12.51□□□□□ -0.41
USE1-202ENST00000445667 ECH1Q13011 328 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 KRTAP27-1Q3LI81 207 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 ZMAT1Q5H9K5 638 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 FAM120AOSQ5T036 256 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 ACSM5Q6NUN0 579 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 FBXW12Q6X9E4 464 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 PAPD5Q8NDF8 572 aaKnown RBP12.51□□□□□ -0.41
USE1-202ENST00000445667 OR2Z1Q8NG97 314 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 OR10S1Q8NGN2 331 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 C1orf159Q96HA4 380 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 DIRC2Q96SL1 478 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 HCAR1Q9BXC0 346 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 YY1AP1Q9H869 796 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 LPAR2Q9HBW0 351 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 CMC2Q9NRP2 79 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 DNAJB9Q9UBS3 223 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 KCNG2Q9UJ96 466 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 WIPI2Q9Y4P8 454 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 MALRD1Q5VYJ5 2156 aa12.51□□□□□ -0.41
USE1-202ENST00000445667 FAM183AA6NL82 134 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 RIIAD1A6NNX1 92 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 CLDN25C9JDP6 229 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 J3QW42 95 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 ZNF593O00488 134 aaPredicted RBP12.5□□□□□ -0.41
USE1-202ENST00000445667 LCATP04180 440 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 FAM157CP0CG43 387 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 HOXB6P17509 224 aaKnown RBP12.5□□□□□ -0.41
USE1-202ENST00000445667 GRK5P34947 590 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 SLC25A1P53007 311 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 GINS1Q14691 196 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 CR1LQ2VPA4 569 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 COLCA1Q6ZS62 124 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 DCXRQ7Z4W1 244 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 OR6K6Q8NGW6 343 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 OTULINQ96BN8 352 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 MDFIQ99750 246 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 C1QTNF5Q9BXJ0 243 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 NTN4Q9HB63 628 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 DCAF16Q9NXF7 216 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 LPAR3Q9UBY5 353 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 COMMD3-BMI1R4GMX3 469 aa12.5□□□□□ -0.41
USE1-202ENST00000445667 JMJD1CQ15652 2540 aa12.49□□□□□ -0.41
USE1-202ENST00000445667 B4DSR2 109 aa12.49□□□□□ -0.41
USE1-202ENST00000445667 TIPRLO75663 272 aa12.49□□□□□ -0.41
USE1-202ENST00000445667 SPARCP09486 303 aa12.49□□□□□ -0.41
USE1-202ENST00000445667 ZNF3P17036 446 aa12.49□□□□□ -0.41
USE1-202ENST00000445667 TNFSF4P23510 183 aa12.49□□□□□ -0.41
USE1-202ENST00000445667 ENTPD1P49961 510 aa12.49□□□□□ -0.41
USE1-202ENST00000445667 TPTEP56180 551 aa12.49□□□□□ -0.41
USE1-202ENST00000445667 ZNF771Q7L3S4 317 aaPredicted RBP12.49□□□□□ -0.41
USE1-202ENST00000445667 ATG16L2Q8NAA4 619 aa12.49□□□□□ -0.41
USE1-202ENST00000445667 BHLHE23Q8NDY6 225 aa12.49□□□□□ -0.41
USE1-202ENST00000445667 OR8G5Q8NG78 346 aa12.49□□□□□ -0.41
USE1-202ENST00000445667 ITLN1Q8WWA0 313 aa12.49□□□□□ -0.41
USE1-202ENST00000445667 RAB1CQ92928 201 aa12.49□□□□□ -0.41
USE1-202ENST00000445667 ZNF582Q96NG8 517 aaPredicted RBP12.49□□□□□ -0.41
USE1-202ENST00000445667 ZNF556Q9HAH1 456 aa12.49□□□□□ -0.41
USE1-202ENST00000445667 CENPMQ9NSP4 180 aa12.49□□□□□ -0.41
USE1-202ENST00000445667 TMEFF2Q9UIK5 374 aaPredicted RBP12.49□□□□□ -0.41
USE1-202ENST00000445667 H0YL77 283 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 M0R135 149 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 IFNA2P01563 188 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 OSMP13725 252 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 ANXA8P13928 327 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 ANOS1P23352 680 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 RASSF2P50749 326 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 DVL1P1P54792 670 aaPredicted RBP12.48□□□□□ -0.41
USE1-202ENST00000445667 GK2Q14410 553 aaPredicted RBP12.48□□□□□ -0.41
USE1-202ENST00000445667 PCK2Q16822 640 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 LINC01590Q5TEZ4 76 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 SLC27A4Q6P1M0 643 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 SPATC1Q76KD6 591 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 OR10AD1Q8NGE0 317 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 ZNF799Q96GE5 643 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 TIMD4Q96H15 378 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 OR2V2Q96R30 315 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 OR51V1Q9H2C8 321 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 ZNF665Q9H7R5 613 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 IL19Q9UHD0 177 aa12.48□□□□□ -0.41
USE1-202ENST00000445667 IGHV3-64DA0A0J9YX35 117 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 ISPDA4D126 451 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms