RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 SSX6Q7RTT6 188 aa11.4□□□□□ -0.58
TIMP1-204ENST00000445623 LHFPL3Q86UP9 236 aa11.4□□□□□ -0.58
TIMP1-204ENST00000445623 SYS1Q8N2H4 156 aa11.4□□□□□ -0.58
TIMP1-204ENST00000445623 KLHL36Q8N4N3 616 aa11.4□□□□□ -0.58
TIMP1-204ENST00000445623 RFLNBQ8N5W9 214 aa11.4□□□□□ -0.58
TIMP1-204ENST00000445623 YIPF7Q8N8F6 280 aa11.4□□□□□ -0.58
TIMP1-204ENST00000445623 OR5L1Q8NGL2 311 aa11.4□□□□□ -0.58
TIMP1-204ENST00000445623 SLC7A6Q92536 515 aa11.4□□□□□ -0.58
TIMP1-204ENST00000445623 DOK1Q99704 481 aa11.4□□□□□ -0.58
TIMP1-204ENST00000445623 RHNO1Q9BSD3 238 aa11.4□□□□□ -0.58
TIMP1-204ENST00000445623 TBCCD1Q9NVR7 557 aa11.4□□□□□ -0.58
TIMP1-204ENST00000445623 SLCO1C1Q9NYB5 712 aa11.4□□□□□ -0.58
TIMP1-204ENST00000445623 GNG8Q9UK08 70 aa11.4□□□□□ -0.58
TIMP1-204ENST00000445623 ERGIC3Q9Y282 383 aa11.4□□□□□ -0.58
TIMP1-204ENST00000445623 PCDHGB5Q9Y5G0 923 aa11.4□□□□□ -0.58
TIMP1-204ENST00000445623 VSTM5A8MXK1 200 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 ATP6V1G2-DDX39BF2Z307 99 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 PSMD9O00233 223 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 SIAH2O43255 324 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 ICMTO60725 284 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 MRPS14O60783 128 aaKnown RBP11.39□□□□□ -0.59
TIMP1-204ENST00000445623 ANXA2P07355 339 aaKnown RBP11.39□□□□□ -0.59
TIMP1-204ENST00000445623 ACSM4P0C7M7 580 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 NR4A1P22736 598 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 TUBG1P23258 451 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 CHN2P52757 468 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 UCP2P55851 309 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 PSMA6P60900 246 aaKnown RBP11.39□□□□□ -0.59
TIMP1-204ENST00000445623 SPOCK1Q08629 439 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 MRPL28Q13084 256 aaKnown RBP11.39□□□□□ -0.59
TIMP1-204ENST00000445623 RNLSQ5VYX0 342 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 NUP37Q8NFH4 326 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 APOBEC3DQ96AK3 386 aaPredicted RBP11.39□□□□□ -0.59
TIMP1-204ENST00000445623 TMEM204Q9BSN7 226 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 CCDC90BQ9GZT6 254 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 DUSP21Q9H596 190 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 MOB1AQ9H8S9 216 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 TUBG2Q9NRH3 451 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 MRM2Q9UI43 246 aaKnown RBP11.39□□□□□ -0.59
TIMP1-204ENST00000445623 CAB39Q9Y376 341 aaPredicted RBP11.39□□□□□ -0.59
TIMP1-204ENST00000445623 ATP23Q9Y6H3 246 aa11.39□□□□□ -0.59
TIMP1-204ENST00000445623 TMEM269A0A1B0GVZ9 245 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 ACOD1A6NK06 481 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 PRR32B1ATL7 298 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 J3QLW9 94 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 SMPD2O60906 423 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 TNFAIP8O95379 198 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 MT-ND5P03915 603 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 LCATP04180 440 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 LIMS3P0CW19 117 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 LIMS4P0CW20 117 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 ZNF19P17023 458 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 ETV1P50549 477 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 ZNF121P58317 390 aaPredicted RBP11.38□□□□□ -0.59
TIMP1-204ENST00000445623 MALLQ13021 153 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 SNTB2Q13425 540 aaKnown RBP11.38□□□□□ -0.59
TIMP1-204ENST00000445623 KCTD21Q4G0X4 260 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 TP53I3Q53FA7 332 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 ZNF704Q6ZNC4 412 aaPredicted RBP11.38□□□□□ -0.59
TIMP1-204ENST00000445623 PRSS48Q7RTY5 328 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 PAQR4Q8N4S7 273 aaPredicted RBP11.38□□□□□ -0.59
TIMP1-204ENST00000445623 KBTBD8Q8NFY9 601 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 OR52H1Q8NGJ2 320 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 OR52N1Q8NH53 320 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 ABHD4Q8TB40 342 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 C14orf79Q96F83 325 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 C4orf36Q96KX1 117 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 MND1Q9BWT6 205 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 C1QTNF5Q9BXJ0 243 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 CDCA4Q9BXL8 241 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 SNX5Q9Y5X3 404 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 R4GMQ9 66 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 USP9YO00507 2555 aaPredicted RBP11.38□□□□□ -0.59
TIMP1-204ENST00000445623 PKDREJQ9NTG1 2253 aa11.38□□□□□ -0.59
TIMP1-204ENST00000445623 TMEM129A0AVI4 362 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 SHISA9B4DS77 424 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 LOC110117498-PIK3R3F6TDL0 507 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 RPP14O95059 124 aaKnown RBP11.37□□□□□ -0.59
TIMP1-204ENST00000445623 LCKP06239 509 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 FAM157BP0CG42 384 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 COL8A1P27658 744 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 LOXP28300 417 aaPredicted RBP11.37□□□□□ -0.59
TIMP1-204ENST00000445623 C21orf33P30042 268 aaPredicted RBP11.37□□□□□ -0.59
TIMP1-204ENST00000445623 SSTR2P30874 369 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 GLRXP35754 106 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 WNT5AP41221 380 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 MMP16P51512 607 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 GBX2P52951 348 aaPredicted RBP11.37□□□□□ -0.59
TIMP1-204ENST00000445623 OR12D2P58182 307 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 RSPO1Q2MKA7 263 aaPredicted RBP11.37□□□□□ -0.59
TIMP1-204ENST00000445623 ZNF684Q5T5D7 378 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 LIPNQ5VXI9 398 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 RGS7BPQ6MZT1 257 aaPredicted RBP11.37□□□□□ -0.59
TIMP1-204ENST00000445623 SVOPQ8N4V2 548 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 OR1J1Q8NGS3 322 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 PGAM5Q96HS1 289 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 HS3ST6Q96QI5 342 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 NR1H4Q96RI1 486 aaPredicted RBP11.37□□□□□ -0.59
TIMP1-204ENST00000445623 ZNF649Q9BS31 505 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 OR10A2Q9H208 303 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms