RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 SLC30A7Q8NEW0 376 aa13.1□□□□□ -0.31
CCNE1-203ENST00000444983 LINC01560Q8TB33 94 aa13.1□□□□□ -0.31
CCNE1-203ENST00000444983 RPS4Y2Q8TD47 263 aa13.1□□□□□ -0.31
CCNE1-203ENST00000444983 SSC4DQ8WTU2 575 aa13.1□□□□□ -0.31
CCNE1-203ENST00000444983 MED18Q9BUE0 208 aa13.1□□□□□ -0.31
CCNE1-203ENST00000444983 FAM206AQ9NX38 181 aa13.1□□□□□ -0.31
CCNE1-203ENST00000444983 KLF2Q9Y5W3 355 aaPredicted RBP13.1□□□□□ -0.31
CCNE1-203ENST00000444983 TUBAL3A6NHL2 446 aa13.09□□□□□ -0.31
CCNE1-203ENST00000444983 CCL2P13500 99 aa13.09□□□□□ -0.31
CCNE1-203ENST00000444983 ATP6V1B1P15313 513 aa13.09□□□□□ -0.31
CCNE1-203ENST00000444983 JUNBP17275 347 aaPredicted RBP13.09□□□□□ -0.31
CCNE1-203ENST00000444983 PEX19P40855 299 aa13.09□□□□□ -0.31
CCNE1-203ENST00000444983 TGM4P49221 684 aa13.09□□□□□ -0.31
CCNE1-203ENST00000444983 GTF2A1P52655 376 aaPredicted RBP13.09□□□□□ -0.31
CCNE1-203ENST00000444983 NANOS3P60323 173 aaKnown RBP13.09□□□□□ -0.31
CCNE1-203ENST00000444983 PSMA6P60900 246 aaKnown RBP13.09□□□□□ -0.31
CCNE1-203ENST00000444983 GALK2Q01415 458 aa13.09□□□□□ -0.31
CCNE1-203ENST00000444983 MRPL28Q13084 256 aaKnown RBP13.09□□□□□ -0.31
CCNE1-203ENST00000444983 KLBQ86Z14 1044 aa13.09□□□□□ -0.31
CCNE1-203ENST00000444983 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.09□□□□□ -0.31
CCNE1-203ENST00000444983 HAVCR2Q8TDQ0 301 aa13.09□□□□□ -0.31
CCNE1-203ENST00000444983 SPTSSAQ969W0 71 aa13.09□□□□□ -0.31
CCNE1-203ENST00000444983 COG8Q96MW5 612 aa13.09□□□□□ -0.31
CCNE1-203ENST00000444983 DACH2Q96NX9 599 aa13.09□□□□□ -0.31
CCNE1-203ENST00000444983 DCLRE1CQ96SD1 692 aaKnown RBP13.09□□□□□ -0.31
CCNE1-203ENST00000444983 DOK1Q99704 481 aa13.09□□□□□ -0.31
CCNE1-203ENST00000444983 G6PC2Q9NQR9 355 aa13.09□□□□□ -0.31
CCNE1-203ENST00000444983 NDRG3Q9UGV2 375 aa13.09□□□□□ -0.31
CCNE1-203ENST00000444983 CADP27708 2225 aa13.09□□□□□ -0.31
CCNE1-203ENST00000444983 SPTAN1Q13813 2472 aaKnown RBP13.09□□□□□ -0.31
CCNE1-203ENST00000444983 F5H5K5 113 aa13.08□□□□□ -0.31
CCNE1-203ENST00000444983 M0R135 149 aa13.08□□□□□ -0.31
CCNE1-203ENST00000444983 TFAP2AP05549 437 aa13.08□□□□□ -0.31
CCNE1-203ENST00000444983 HSD11B1P28845 292 aa13.08□□□□□ -0.31
CCNE1-203ENST00000444983 ZNF83P51522 516 aa13.08□□□□□ -0.31
CCNE1-203ENST00000444983 PRKXP51817 358 aa13.08□□□□□ -0.31
CCNE1-203ENST00000444983 BDH1Q02338 343 aa13.08□□□□□ -0.31
CCNE1-203ENST00000444983 MFGE8Q08431 387 aaPredicted RBP13.08□□□□□ -0.31
CCNE1-203ENST00000444983 MED22Q15528 200 aa13.08□□□□□ -0.31
CCNE1-203ENST00000444983 TAF13Q15543 124 aa13.08□□□□□ -0.31
CCNE1-203ENST00000444983 CCDC58Q4VC31 144 aa13.08□□□□□ -0.31
CCNE1-203ENST00000444983 SYT6Q5T7P8 510 aaPredicted RBP13.08□□□□□ -0.31
CCNE1-203ENST00000444983 DRAM2Q6UX65 266 aa13.08□□□□□ -0.31
CCNE1-203ENST00000444983 FAM220AQ7Z4H9 259 aa13.08□□□□□ -0.31
CCNE1-203ENST00000444983 FCGR1BQ92637 280 aa13.08□□□□□ -0.31
CCNE1-203ENST00000444983 ZNF799Q96GE5 643 aa13.08□□□□□ -0.31
CCNE1-203ENST00000444983 MRPS26Q9BYN8 205 aaKnown RBP13.08□□□□□ -0.31
CCNE1-203ENST00000444983 ISYNA1Q9NPH2 558 aa13.08□□□□□ -0.31
CCNE1-203ENST00000444983 GRIP1Q9Y3R0 1128 aa13.08□□□□□ -0.31
CCNE1-203ENST00000444983 SIRT4Q9Y6E7 314 aaPredicted RBP13.08□□□□□ -0.31
CCNE1-203ENST00000444983 R4GMQ9 66 aa13.08□□□□□ -0.31
CCNE1-203ENST00000444983 HEATR1Q9H583 2144 aaKnown RBP13.08□□□□□ -0.32
CCNE1-203ENST00000444983 TMEM269A0A1B0GVZ9 245 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 C5orf49A4QMS7 147 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 OGG1O15527 345 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 RPP14O95059 124 aaKnown RBP13.08□□□□□ -0.32
CCNE1-203ENST00000444983 APOC1P02654 83 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 APLNRP35414 380 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 PSMB10P40306 273 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 WNT5AP41221 380 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 CX3CR1P49238 355 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 GDI2P50395 445 aaKnown RBP13.08□□□□□ -0.32
CCNE1-203ENST00000444983 CCR9P51686 369 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 TPTEP56180 551 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 ZNF121P58317 390 aaPredicted RBP13.08□□□□□ -0.32
CCNE1-203ENST00000444983 ZNF367Q7RTV3 350 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 CATSPERDQ86XM0 798 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 PRSS35Q8N3Z0 413 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 IL17RDQ8NFM7 739 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 OR2G2Q8NGZ5 317 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 MUL1Q969V5 352 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 ZC3HAV1LQ96H79 300 aaKnown RBP13.08□□□□□ -0.32
CCNE1-203ENST00000444983 OPALINQ96PE5 141 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 MGLLQ99685 303 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 C1QTNF5Q9BXJ0 243 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 TRIM36Q9NQ86 728 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 FRRS1LQ9P0K9 344 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 ZNF319Q9P2F9 582 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 ST6GALNAC2Q9UJ37 374 aa13.08□□□□□ -0.32
CCNE1-203ENST00000444983 UTP20O75691 2785 aaKnown RBP13.08□□□□□ -0.32
CCNE1-203ENST00000444983 GCN1Q92616 2671 aaKnown RBP13.07□□□□□ -0.32
CCNE1-203ENST00000444983 DPRXA6NFQ7 191 aa13.07□□□□□ -0.32
CCNE1-203ENST00000444983 ACOD1A6NK06 481 aa13.07□□□□□ -0.32
CCNE1-203ENST00000444983 INMTO95050 263 aa13.07□□□□□ -0.32
CCNE1-203ENST00000444983 CLPTM1O96005 669 aa13.07□□□□□ -0.32
CCNE1-203ENST00000444983 CD40P25942 277 aa13.07□□□□□ -0.32
CCNE1-203ENST00000444983 CALCRP30988 508 aa13.07□□□□□ -0.32
CCNE1-203ENST00000444983 NAAAQ02083 359 aa13.07□□□□□ -0.32
CCNE1-203ENST00000444983 MLLT11Q13015 90 aaPredicted RBP13.07□□□□□ -0.32
CCNE1-203ENST00000444983 TBC1D28Q2M2D7 210 aa13.07□□□□□ -0.32
CCNE1-203ENST00000444983 ZNF829Q3KNS6 432 aaPredicted RBP13.07□□□□□ -0.32
CCNE1-203ENST00000444983 DMKNQ6E0U4 476 aaPredicted RBP13.07□□□□□ -0.32
CCNE1-203ENST00000444983 RPL22L1Q6P5R6 122 aaKnown RBP13.07□□□□□ -0.32
CCNE1-203ENST00000444983 WFDC8Q8IUA0 241 aa13.07□□□□□ -0.32
CCNE1-203ENST00000444983 DMRTC2Q8IXT2 367 aaPredicted RBP13.07□□□□□ -0.32
CCNE1-203ENST00000444983 ZNF101Q8IZC7 436 aa13.07□□□□□ -0.32
CCNE1-203ENST00000444983 OR1J2Q8NGS2 313 aa13.07□□□□□ -0.32
CCNE1-203ENST00000444983 NUFIP1Q9UHK0 495 aaKnown RBP13.07□□□□□ -0.32
CCNE1-203ENST00000444983 USP9YO00507 2555 aaPredicted RBP13.06□□□□□ -0.32
CCNE1-203ENST00000444983 IGHV2OR16-5A0A0B4J2B6 119 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms