RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 TEX19Q8NA77 164 aa20.23■□□□□ 0.83
CTDSPL-206ENST00000443503 MOGAT1Q96PD6 335 aa20.23■□□□□ 0.83
CTDSPL-206ENST00000443503 ARPC5LQ9BPX5 153 aa20.23■□□□□ 0.83
CTDSPL-206ENST00000443503 LANCL2Q9NS86 450 aa20.23■□□□□ 0.83
CTDSPL-206ENST00000443503 WNT16Q9UBV4 365 aa20.23■□□□□ 0.83
CTDSPL-206ENST00000443503 TIMM10BQ9Y5J6 103 aa20.23■□□□□ 0.83
CTDSPL-206ENST00000443503 CSRP3P50461 194 aa20.23■□□□□ 0.83
CTDSPL-206ENST00000443503 PLEKHB1Q9UF11 243 aaPredicted RBP20.23■□□□□ 0.83
CTDSPL-206ENST00000443503 PTPRFP10586 1907 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 A0A096LPE4 126 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 A0A1W2PPZ6 126 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 ARGFXA6NJG6 315 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 TPOP07202 933 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 PI3P19957 117 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 NME2P22392 152 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 MYBPHQ13203 477 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 ZAR1Q86SH2 424 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 OR10G3Q8NGC4 313 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 DEFB127Q9H1M4 99 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 TRAPPC4Q9Y296 219 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 EP300Q09472 2414 aaPredicted RBP20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 CEBPZOSA8MTT3 80 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 ALG1L2C9J202 215 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 MSTNO14793 375 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 SLC25A1P53007 311 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 DUSP2Q05923 314 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 SHBQ15464 509 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 RAB9BQ9NP90 201 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 LRP12Q9Y561 859 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 A0A1B0GTH9 108 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 TMEM200CA6NKL6 621 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 OPRM1P35372 400 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 TFF2Q03403 129 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 SUMF1Q8NBK3 374 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 OR1J2Q8NGS2 313 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 ARRDC1-AS1Q9H2J1 176 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 ZNF141Q15928 474 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 SDSLQ96GA7 329 aa20.22■□□□□ 0.83
CTDSPL-206ENST00000443503 C1orf196B1AJZ1 125 aa20.21■□□□□ 0.83
CTDSPL-206ENST00000443503 SLC17A2O00624 439 aa20.21■□□□□ 0.83
CTDSPL-206ENST00000443503 CLDN15P56746 228 aa20.21■□□□□ 0.83
CTDSPL-206ENST00000443503 ZNF121P58317 390 aaPredicted RBP20.21■□□□□ 0.83
CTDSPL-206ENST00000443503 ARF1P84077 181 aaKnown RBP20.21■□□□□ 0.83
CTDSPL-206ENST00000443503 OR51F2Q8NH61 342 aa20.21■□□□□ 0.83
CTDSPL-206ENST00000443503 ANKRD9Q96BM1 317 aaPredicted RBP20.21■□□□□ 0.83
CTDSPL-206ENST00000443503 LALBAP00709 142 aa20.21■□□□□ 0.83
CTDSPL-206ENST00000443503 MAMSTRQ6ZN01 415 aa20.21■□□□□ 0.83
CTDSPL-206ENST00000443503 HSD17B11Q8NBQ5 300 aa20.21■□□□□ 0.83
CTDSPL-206ENST00000443503 ALKBH3Q96Q83 286 aaPredicted RBP20.21■□□□□ 0.83
CTDSPL-206ENST00000443503 DBPQ10586 325 aaPredicted RBP20.21■□□□□ 0.83
CTDSPL-206ENST00000443503 OR56B2PQ8NGI1 322 aa20.21■□□□□ 0.83
CTDSPL-206ENST00000443503 WDFY2Q96P53 400 aa20.21■□□□□ 0.83
CTDSPL-206ENST00000443503 C1QTNF6Q9BXI9 259 aa20.21■□□□□ 0.83
CTDSPL-206ENST00000443503 PLEKHA3Q9HB20 300 aa20.21■□□□□ 0.83
CTDSPL-206ENST00000443503 IGHV3-64DA0A0J9YX35 117 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 HRKO00198 91 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 CBR3O75828 277 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 B4GALT1P15291 398 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 PPT1P50897 306 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 CLN3Q13286 438 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 MSMO1Q15800 293 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 ESCO2Q56NI9 601 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 WDR38Q5JTN6 314 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 LPCAT3Q6P1A2 487 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 DND1Q8IYX4 353 aaKnown RBP20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 OR52H1Q8NGJ2 320 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 TAS2R5Q9NYW4 299 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 EXOGQ9Y2C4 368 aaKnown RBP20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 TNFSF11O14788 317 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 EFSO43281 561 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 IFNA17P01571 189 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 GNB3P16520 340 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 RAB31Q13636 194 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 CLINT1Q14677 625 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 OR4C16Q8NGL9 310 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 NECAP2Q9NVZ3 263 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 FLRT3Q9NZU0 649 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 AKR7A2O43488 359 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 RPA2P15927 270 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 ZNF136P52737 540 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 GUCA2AQ02747 115 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 TMUB2Q71RG4 321 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 OR5AS1Q8N127 324 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 GNRHR2Q96P88 292 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 FAM221AA4D161 298 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 PDGFAP04085 211 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 MMP15P51511 669 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 EMP3P54852 163 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 OR2I1PQ8NGU4 316 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 ROBO4Q8WZ75 1007 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 PLSCR3Q9NRY6 295 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 FBXO7Q9Y3I1 522 aa20.2■□□□□ 0.82
CTDSPL-206ENST00000443503 GRPP07492 148 aa20.19■□□□□ 0.82
CTDSPL-206ENST00000443503 PEA15Q15121 130 aa20.19■□□□□ 0.82
CTDSPL-206ENST00000443503 VSTM2LQ96N03 204 aa20.19■□□□□ 0.82
CTDSPL-206ENST00000443503 SNRNP70P08621 437 aaKnown RBP20.19■□□□□ 0.82
CTDSPL-206ENST00000443503 PEBP1P30086 187 aaKnown RBP20.19■□□□□ 0.82
CTDSPL-206ENST00000443503 RFX2P48378 723 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms