RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 RPLP0P6Q8NHW5 317 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 NEK7Q8TDX7 302 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 DOK4Q8TEW6 326 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 APOBEC4Q8WW27 367 aaKnown RBP3.72□□□□□ -1.81
VPS50-206ENST00000443443 TRUB1Q8WWH5 349 aaKnown RBP3.72□□□□□ -1.81
VPS50-206ENST00000443443 NELFBQ8WX92 580 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 CREB3L1Q96BA8 519 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 PPWD1Q96BP3 646 aaKnown RBP3.72□□□□□ -1.81
VPS50-206ENST00000443443 PRAP1Q96NZ9 151 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 OXGR1Q96P68 337 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 MS4A4EQ96PG1 132 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 OR5B12Q96R08 314 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 OR8B4Q96RC9 309 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 FOXC2Q99958 501 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 FAM173AQ9BQD7 235 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 HES7Q9BYE0 225 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 ULBP1Q9BZM6 244 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 BCL2L14Q9BZR8 327 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 TMEM38AQ9H6F2 299 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 ABCB9Q9NP78 766 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 CTPS2Q9NRF8 586 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 GID8Q9NWU2 228 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 SLC25A37Q9NYZ2 338 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 DUX4Q9UBX2 424 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 CIDEBQ9UHD4 219 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 RSPH14Q9UHP6 348 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 RARRES3Q9UL19 164 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 TP53TG3Q9ULZ0 132 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 ERVW-1Q9UQF0 538 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 ASF1AQ9Y294 204 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 SNX24Q9Y343 169 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 CNTNAP1P78357 1384 aa3.72□□□□□ -1.81
VPS50-206ENST00000443443 MROH7Q68CQ1 1323 aa3.71□□□□□ -1.81
VPS50-206ENST00000443443 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 IGHV3OR16-10A0A075B7F0 116 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 KIR2DS1A0A191URI9 304 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 SLC5A10A0PJK1 596 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 OR2AT4A6NND4 320 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 EPM2AB3EWF7 344 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 CDC40O60508 579 aaKnown RBP eCLIP3.71□□□□□ -1.82
VPS50-206ENST00000443443 SHOX2O60902 331 aaPredicted RBP3.71□□□□□ -1.82
VPS50-206ENST00000443443 MPZL1O95297 269 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 GCGP01275 180 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 ISG15P05161 165 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 FGF1P05230 155 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 RPLP0P05388 317 aaKnown RBP3.71□□□□□ -1.82
VPS50-206ENST00000443443 ZNF35P13682 527 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 TBPP20226 339 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 OR4D2P58180 307 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 PAFAH1B2P68402 229 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 ZNF85Q03923 595 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 ECH1Q13011 328 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 DYNC1I2Q13409 638 aaKnown RBP3.71□□□□□ -1.82
VPS50-206ENST00000443443 UNC119Q13432 240 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 KIR2DS1Q14954 304 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 GPNMBQ14956 572 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 SLC9A3R2Q15599 337 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 ZCWPW2Q504Y3 356 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 SLC25A30Q5SVS4 291 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 HACD4Q5VWC8 232 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 LRRN1Q6UXK5 716 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 APOOLQ6UXV4 268 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 STOX1Q6ZVD7 989 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 PLA2G4DQ86XP0 818 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 CALHM1Q8IU99 346 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 WDFY1Q8IWB7 410 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 SLC22A15Q8IZD6 547 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 AQP11Q8NBQ7 271 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 OR5L1Q8NGL2 311 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 SPPL2AQ8TCT8 520 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 MCOLN3Q8TDD5 553 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 RILPQ96NA2 401 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 RCHY1Q96PM5 261 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 SORT1Q99523 831 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 TSNAXQ99598 290 aaKnown RBP3.71□□□□□ -1.82
VPS50-206ENST00000443443 OVOL2Q9BRP0 275 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 CALN1Q9BXU9 219 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 ARL6Q9H0F7 186 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 PPDPFQ9H3Y8 114 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 CWH43Q9H720 699 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 SIAEQ9HAT2 523 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 ELL3Q9HB65 397 aaPredicted RBP3.71□□□□□ -1.82
VPS50-206ENST00000443443 RDH14Q9HBH5 336 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 B3GAT2Q9NPZ5 323 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 B3GNT2Q9NY97 397 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 GOLT1BQ9Y3E0 138 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 MTCH2Q9Y6C9 303 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 METP08581 1390 aa3.71□□□□□ -1.82
VPS50-206ENST00000443443 C9orf84Q5VXU9 1444 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.7□□□□□ -1.82
VPS50-206ENST00000443443 A0A1W2PRG6 482 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 VSTM2BA6NLU5 285 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 FAM166BA8MTA8 275 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 GFYI3L273 518 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 DFFAO00273 331 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 PFDN6O15212 129 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 CRXO43186 299 aaPredicted RBP3.7□□□□□ -1.82
VPS50-206ENST00000443443 MPZL2O60487 215 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 KRT75O95678 551 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 NUDT14O95848 222 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms