RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 GTF2H2Q13888 395 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 LASP1Q14847 261 aaKnown RBP5.4□□□□□ -1.55
SSXP3-201ENST00000442971 KIR3DS1Q14943 382 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 FASTKD3Q14CZ7 662 aaKnown RBP5.4□□□□□ -1.55
SSXP3-201ENST00000442971 KCTD19Q17RG1 926 aaPredicted RBP5.4□□□□□ -1.55
SSXP3-201ENST00000442971 PNLIPRP3Q17RR3 467 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 TM4SF20Q53R12 229 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 WDR38Q5JTN6 314 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 GTF2H2CQ6P1K8 395 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 C4orf22Q6V702 233 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 WDR88Q6ZMY6 472 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 ZNF836Q6ZNA1 936 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 GOLGA7Q7Z5G4 137 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 ANKRD13BQ86YJ7 626 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 LRRC18Q8N456 261 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 ARFGAP2Q8N6H7 521 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 RNF152Q8N8N0 203 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 AKR7LQ8NHP1 331 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 MFSD8Q8NHS3 518 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 AENQ8WTP8 325 aaKnown RBP5.4□□□□□ -1.55
SSXP3-201ENST00000442971 SLA2Q9H6Q3 261 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 NOL11Q9H8H0 719 aaKnown RBP5.4□□□□□ -1.55
SSXP3-201ENST00000442971 BRF2Q9HAW0 419 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 VPS29Q9UBQ0 182 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 STUB1Q9UNE7 303 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 MYRFQ9Y2G1 1151 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 FBXO7Q9Y3I1 522 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 HILPDAQ9Y5L2 63 aa5.4□□□□□ -1.55
SSXP3-201ENST00000442971 ZNF726A6NNF4 738 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 M0QZK8 103 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 UBXN8O00124 270 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 HLA-DPB1P04440 258 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 ARG1P05089 322 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 P0DMU3 169 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 FAM231AP0DMU4 169 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 FAM231CP0DMU5 169 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 UMPSP11172 480 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 HLA-DOBP13765 273 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 POU1F1P28069 291 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 BMI1P35226 326 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 ISL1P61371 349 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 PITPNAQ00169 270 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 PDIA2Q13087 525 aaKnown RBP5.39□□□□□ -1.55
SSXP3-201ENST00000442971 FOXE3Q13461 319 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 TEDDM1Q5T9Z0 273 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 LCE3BQ5TA77 95 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 TEX36Q5VZQ5 186 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 AP1ARQ63HQ0 302 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 Q6ZRM9 215 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 RANBP3LQ86VV4 465 aaPredicted RBP5.39□□□□□ -1.55
SSXP3-201ENST00000442971 CATSPERDQ86XM0 798 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 UEVLDQ8IX04 471 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 STPG2Q8N412 459 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 CDC26Q8NHZ8 85 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 UBALD1Q8TB05 177 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 DEFB104AQ8WTQ1 72 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 CHAC2Q8WUX2 184 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 PTP4A1Q93096 173 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 MISP3Q96FF7 219 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 CCDC140Q96MF4 163 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 ZNF582Q96NG8 517 aaPredicted RBP5.39□□□□□ -1.55
SSXP3-201ENST00000442971 SDF2Q99470 211 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 MFFQ9GZY8 342 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 IQCGQ9H095 443 aaKnown RBP5.39□□□□□ -1.55
SSXP3-201ENST00000442971 KCNN2Q9H2S1 579 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 POPDC3Q9HBV1 291 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 EXOSC3Q9NQT5 275 aaKnown RBP5.39□□□□□ -1.55
SSXP3-201ENST00000442971 IFNKQ9P0W0 207 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 ATP6V1HQ9UI12 483 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 COMMD3-BMI1R4GMX3 469 aa5.39□□□□□ -1.55
SSXP3-201ENST00000442971 FAT3Q8TDW7 4589 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 CLDN24A6NM45 220 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 H0Y980 276 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 I3L521 148 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 OR7A17O14581 309 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 NPIPB7O75200 414 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 TPPPO94811 219 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 WISP3O95389 354 aaPredicted RBP5.38□□□□□ -1.55
SSXP3-201ENST00000442971 ABHD16AO95870 558 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 MLNP12872 115 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 RAC2P15153 192 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 ZNF32P17041 273 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 FPR3P25089 353 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 GSTM5P46439 218 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 SLURP1P55000 103 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 GPR50Q13585 617 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 SNX1Q13596 522 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 MAPK14Q16539 360 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 RNASEH2BQ5TBB1 312 aaKnown RBP5.38□□□□□ -1.55
SSXP3-201ENST00000442971 OR2T2Q6IF00 324 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 LETMD1Q6P1Q0 360 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 THNSL2Q86YJ6 484 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 PGAM4Q8N0Y7 254 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 DEFB125Q8N687 156 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 CLDN22Q8N7P3 220 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 STAG3L4Q8TBR4 150 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 SELENOMQ8WWX9 145 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 ATP6V1E2Q96A05 226 aa5.38□□□□□ -1.55
SSXP3-201ENST00000442971 CIDECQ96AQ7 238 aaPredicted RBP5.38□□□□□ -1.55
SSXP3-201ENST00000442971 MPP4Q96JB8 637 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms