RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 ASIC5Q9NY37 505 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 PPP1R3CQ9UQK1 317 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 HDGFL3Q9Y3E1 203 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 USF1P22415 310 aaPredicted RBP6.1□□□□□ -1.43
USP46-201ENST00000441222 CD27P26842 260 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 PSMB5P28074 263 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 PNLIPRP3Q17RR3 467 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 NCR3LG1Q68D85 454 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 TRNP1Q6NT89 227 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 TMEM182Q6ZP80 229 aaPredicted RBP6.1□□□□□ -1.43
USP46-201ENST00000441222 DTWD2Q8NBA8 298 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 PIGTQ969N2 578 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 DDOQ99489 341 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 SMIM7Q9BQ49 75 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 FAM117AQ9C073 453 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 TGIF2Q9GZN2 237 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 C11orf54Q9H0W9 315 aaPredicted RBP6.1□□□□□ -1.43
USP46-201ENST00000441222 SLC5A6Q9Y289 635 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 MEIKINA0A087WXM9 373 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 M0R135 149 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 DSCR3O14972 297 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 GPR37O15354 613 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 HPP00738 406 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 AREGP15514 252 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 CBR1P16152 277 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 ALOX5APP20292 161 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 PIGAP37287 484 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 HNRNPA3P51991 378 aaKnown RBP6.1□□□□□ -1.43
USP46-201ENST00000441222 KIAA1024LP59773 190 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 ERVFC1P60507 584 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 PPP1CBP62140 327 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 ZNF154Q13106 437 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 DUSP8Q13202 625 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 IQCJQ1A5X6 159 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 ZDHHC23Q8IYP9 409 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 MFSD4AQ8N468 514 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 NANOGP1Q8N7R0 232 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 OR4C5Q8NGB2 326 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 OR13D1Q8NGV5 346 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 NEIL1Q96FI4 390 aaPredicted RBP6.1□□□□□ -1.43
USP46-201ENST00000441222 ZNF799Q96GE5 643 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 C12orf49Q9H741 205 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 SLC23A1Q9UHI7 598 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 ZNF391Q9UJN7 358 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 FER1L5A0AVI2 2057 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 ZNF207O43670 478 aaKnown RBP6.1□□□□□ -1.43
USP46-201ENST00000441222 KCNJ3P48549 501 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 LBX1P52954 281 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 ASAH1Q13510 395 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 FCN2Q15485 313 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 ANKRD16Q6P6B7 361 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 ABHD17CQ6PCB6 329 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 ISL2Q96A47 359 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 TMEM56Q96MV1 263 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 MACROD1Q9BQ69 325 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 S1PR5Q9H228 398 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 CXorf36Q9H7Y0 433 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 HCFC2Q9Y5Z7 792 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 TIAM2Q8IVF5 1701 aa6.1□□□□□ -1.43
USP46-201ENST00000441222 CST5P28325 142 aaPredicted RBP6.09□□□□□ -1.43
USP46-201ENST00000441222 CCKARP32238 428 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 SRP9P49458 86 aaKnown RBP6.09□□□□□ -1.43
USP46-201ENST00000441222 MAT1AQ00266 395 aaKnown RBP6.09□□□□□ -1.43
USP46-201ENST00000441222 CPEB2Q7Z5Q1 589 aaKnown RBP6.09□□□□□ -1.43
USP46-201ENST00000441222 FAM26EQ8N5C1 309 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 ARIH2OSQ8N7S6 290 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 ZNF775Q96BV0 537 aaPredicted RBP6.09□□□□□ -1.43
USP46-201ENST00000441222 GMLQ99445 158 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 OCIAD1Q9NX40 245 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 EMCNQ9ULC0 261 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 PROCRQ9UNN8 238 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 ZNF749O43361 778 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 B3GALNT1O75752 331 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 PNPP00491 289 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 HRASP01112 189 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 IRS1P35568 1242 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 CCR6P51684 374 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 FABP9Q0Z7S8 132 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 COL9A3Q14050 684 aaPredicted RBP6.09□□□□□ -1.43
USP46-201ENST00000441222 SMAD2Q15796 467 aaKnown RBP6.09□□□□□ -1.43
USP46-201ENST00000441222 ZNF787Q6DD87 383 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 LAIR1Q6GTX8 287 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 UQCC3Q6UW78 93 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 BTNL3Q6UXE8 466 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 LYSMD2Q8IV50 215 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 TMEM255BQ8WV15 326 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 THOC3Q96J01 351 aaKnown RBP6.09□□□□□ -1.43
USP46-201ENST00000441222 PLA2G12AQ9BZM1 189 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 CYB5R1Q9UHQ9 305 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 SLC17A4Q9Y2C5 497 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 PRSS21Q9Y6M0 314 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 C4AP0C0L4 1744 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 C4BP0C0L5 1744 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 A0A087WV62 115 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 CD22P20273 847 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 PRTGQ2VWP7 1150 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 FAM78AQ5JUQ0 283 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 LDLRAD1Q5T700 205 aa6.09□□□□□ -1.43
USP46-201ENST00000441222 TMEM81Q6P7N7 255 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms