RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 LINC01387J3KSC0 135 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 CBR3O75828 277 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 YES1P07947 543 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 CCL3P10147 92 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 IGFBP3P17936 291 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-209ENST00000440653 ADRA2CP18825 462 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 BTCP35070 178 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 GDNFP39905 211 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 RPS27P42677 84 aaKnown RBP8.11□□□□□ -1.11
HDAC6-209ENST00000440653 DNASE1L1P49184 302 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 ZNF133P52736 654 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-209ENST00000440653 TAS2R20P59543 309 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 ACTBP60709 375 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 RRAS2P62070 204 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-209ENST00000440653 LSM6P62312 80 aaKnown RBP8.11□□□□□ -1.11
HDAC6-209ENST00000440653 RPS15P62841 145 aaKnown RBP8.11□□□□□ -1.11
HDAC6-209ENST00000440653 RAC1P63000 192 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 ACTG1P63261 375 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 DGCR2P98153 550 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 CD300CQ08708 224 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 HIST3H3Q16695 136 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 SLC25A47Q6Q0C1 308 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 NHLRC1Q6VVB1 395 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 FOXL2NBQ6ZUU3 175 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 RAB11FIP2Q7L804 512 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 KRT74Q7RTS7 529 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 OR13C3Q8NGS6 347 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 OR56B4Q8NH76 319 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 CT55Q8WUE5 264 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 FCAMRQ8WWV6 532 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 C11orf40Q8WZ69 217 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 INTS12Q96CB8 462 aaKnown RBP8.11□□□□□ -1.11
HDAC6-209ENST00000440653 SLAMF6Q96DU3 332 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 RNF31Q96EP0 1072 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 ST6GAL2Q96JF0 529 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 OR2M2Q96R28 347 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 SMAD5Q99717 465 aaKnown RBP8.11□□□□□ -1.11
HDAC6-209ENST00000440653 GPR87Q9BY21 358 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 DIABLOQ9NR28 239 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 ZNF107Q9UII5 783 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-209ENST00000440653 RCE1Q9Y256 329 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 EMC9Q9Y3B6 208 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 MRPS18CQ9Y3D5 142 aaKnown RBP8.11□□□□□ -1.11
HDAC6-209ENST00000440653 HRH3Q9Y5N1 445 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 ESPL1Q14674 2120 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 TMEM269A0A1B0GVZ9 245 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 LOC390937A0A1W2PQ73 354 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 FAM172BPA6NC97 362 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 GGT3PA6NGU5 568 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 NPIPA2E9PIF3 369 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 NPIPA3F8WFD2 350 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 SULT1C2O00338 296 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 RGS13O14921 159 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 XRCC3O43542 346 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 EFNA2O43921 213 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 GLSO94925 669 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-209ENST00000440653 GPANK1O95872 356 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 APOC1P02654 83 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 MAS1P04201 325 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 CSF1P09603 554 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 CD37P11049 281 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 RAB6AP20340 208 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 STOMP27105 288 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 HSD11B1P28845 292 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 ERP29P30040 261 aaKnown RBP8.1□□□□□ -1.11
HDAC6-209ENST00000440653 SFTPDP35247 375 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 GUCA1AP43080 201 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-209ENST00000440653 CSNK1A1P48729 337 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 MRPS15P82914 257 aaKnown RBP8.1□□□□□ -1.11
HDAC6-209ENST00000440653 H3F3AP84243 136 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 RIPPLY1Q0D2K3 151 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 MAB21L1Q13394 359 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 FAM189A2Q15884 450 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 ETFDHQ16134 617 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 NDUFA5Q16718 116 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 TMEM176BQ3YBM2 270 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-209ENST00000440653 SLC36A2Q495M3 483 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 CD276Q5ZPR3 534 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 FAM166AQ6J272 317 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 H3F3CQ6NXT2 135 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 ANKRD16Q6P6B7 361 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 DNM1P46Q6ZS02 220 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 BTN2A1Q7KYR7 527 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 FCRLAQ7L513 359 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-209ENST00000440653 SYT9Q86SS6 491 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 GPAT4Q86UL3 456 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 LIX1LQ8IVB5 337 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 ELMOD2Q8IZ81 293 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 OR51A4Q8NGJ6 313 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 OR10AC1Q8NH08 325 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 ASB5Q8WWX0 329 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 DNAJA3Q96EY1 480 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 SCMH1Q96GD3 660 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 ZNF486Q96H40 463 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-209ENST00000440653 ZFP3Q96NJ6 502 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 NPAS1Q99742 590 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 NUDT16L1Q9BRJ7 211 aaKnown RBP8.1□□□□□ -1.11
HDAC6-209ENST00000440653 UQCC2Q9BRT2 126 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 CDCP1Q9H5V8 836 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms