RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 CYB561A3Q8NBI2 242 aa16.81■□□□□ 0.28
SHROOM1-204ENST00000440118 ITLN1Q8WWA0 313 aa16.81■□□□□ 0.28
SHROOM1-204ENST00000440118 ZNF582Q96NG8 517 aaPredicted RBP16.81■□□□□ 0.28
SHROOM1-204ENST00000440118 TMEM106BQ9NUM4 274 aa16.81■□□□□ 0.28
SHROOM1-204ENST00000440118 PPP1R3CQ9UQK1 317 aa16.81■□□□□ 0.28
SHROOM1-204ENST00000440118 NPTNQ9Y639 398 aa16.81■□□□□ 0.28
SHROOM1-204ENST00000440118 TCRBV5S2A0A599 114 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 PLPP2O43688 288 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 SOX14O95416 240 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 SBK2P0C263 348 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 PYCR1P32322 319 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 SLC6A9P48067 706 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 HMGA2P52926 109 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 HIST1H3AP68431 136 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 MALLQ13021 153 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 SPRNQ5BIV9 151 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 HIST2H3PS2Q5TEC6 136 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 DCAF12L2Q5VW00 463 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 OR2T5Q6IEZ7 315 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 SLC27A4Q6P1M0 643 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 RASSF6Q6ZTQ3 369 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 HIST2H3AQ71DI3 136 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 KLHL36Q8N4N3 616 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 SPICQ8N5J4 248 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 BHLHE23Q8NDY6 225 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 OR10AD1Q8NGE0 317 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 OR2T29Q8NH02 315 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 OR2V2Q96R30 315 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 TSSK6Q9BXA6 273 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 PLA2G12AQ9BZM1 189 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 WDR76Q9H967 626 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 IL19Q9UHD0 177 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 KCNG2Q9UJ96 466 aa16.8■□□□□ 0.28
SHROOM1-204ENST00000440118 FBN3Q75N90 2809 aa16.79■□□□□ 0.28
SHROOM1-204ENST00000440118 GASTP01350 101 aa16.79■□□□□ 0.28
SHROOM1-204ENST00000440118 LCATP04180 440 aa16.79■□□□□ 0.28
SHROOM1-204ENST00000440118 SELEP16581 610 aa16.79■□□□□ 0.28
SHROOM1-204ENST00000440118 TRAP1Q12931 704 aaKnown RBP16.79■□□□□ 0.28
SHROOM1-204ENST00000440118 FBXW12Q6X9E4 464 aa16.79■□□□□ 0.28
SHROOM1-204ENST00000440118 Q6ZR03 302 aa16.79■□□□□ 0.28
SHROOM1-204ENST00000440118 OR4C15Q8NGM1 316 aa16.79■□□□□ 0.28
SHROOM1-204ENST00000440118 OR13G1Q8NGZ3 307 aa16.79■□□□□ 0.28
SHROOM1-204ENST00000440118 SPTSSAQ969W0 71 aa16.79■□□□□ 0.28
SHROOM1-204ENST00000440118 ASB9Q96DX5 294 aa16.79■□□□□ 0.28
SHROOM1-204ENST00000440118 C19orf24Q9BVV8 132 aa16.79■□□□□ 0.28
SHROOM1-204ENST00000440118 CYB5R1Q9UHQ9 305 aa16.79■□□□□ 0.28
SHROOM1-204ENST00000440118 BAIAP2Q9UQB8 552 aa16.79■□□□□ 0.28
SHROOM1-204ENST00000440118 TVP23AA6NH52 213 aa16.78■□□□□ 0.28
SHROOM1-204ENST00000440118 BHLHE40O14503 412 aa16.78■□□□□ 0.28
SHROOM1-204ENST00000440118 DEAF1O75398 565 aaPredicted RBP16.78■□□□□ 0.28
SHROOM1-204ENST00000440118 IFNGP01579 166 aa16.78■□□□□ 0.28
SHROOM1-204ENST00000440118 SPARCP09486 303 aa16.78■□□□□ 0.28
SHROOM1-204ENST00000440118 SRP9P49458 86 aaKnown RBP16.78■□□□□ 0.28
SHROOM1-204ENST00000440118 TPTEP56180 551 aa16.78■□□□□ 0.28
SHROOM1-204ENST00000440118 LCN2P80188 198 aa16.78■□□□□ 0.28
SHROOM1-204ENST00000440118 TAF13Q15543 124 aa16.78■□□□□ 0.28
SHROOM1-204ENST00000440118 ZNF283Q8N7M2 679 aa16.78■□□□□ 0.28
SHROOM1-204ENST00000440118 OR2T33Q8NG76 320 aa16.78■□□□□ 0.28
SHROOM1-204ENST00000440118 OR8G5Q8NG78 346 aa16.78■□□□□ 0.28
SHROOM1-204ENST00000440118 OR51L1Q8NGJ5 315 aa16.78■□□□□ 0.28
SHROOM1-204ENST00000440118 OR9Q1Q8NGQ5 310 aa16.78■□□□□ 0.28
SHROOM1-204ENST00000440118 THTPAQ9BU02 230 aa16.78■□□□□ 0.28
SHROOM1-204ENST00000440118 DCAF16Q9NXF7 216 aa16.78■□□□□ 0.28
SHROOM1-204ENST00000440118 IL20Q9NYY1 176 aa16.78■□□□□ 0.28
SHROOM1-204ENST00000440118 RIIAD1A6NNX1 92 aa16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 GNGT2O14610 69 aa16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 ACSM4P0C7M7 580 aa16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 RAP2AP10114 183 aa16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 ZNF3P17036 446 aa16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 GGT2P36268 569 aa16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 BTG1P62324 171 aa16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 MS4A2Q01362 244 aa16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 HNRNPA0Q13151 305 aaKnown RBP16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 MICAQ29983 383 aa16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 ZNF770Q6IQ21 691 aaPredicted RBP16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 MRPL21Q7Z2W9 205 aaKnown RBP16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 SLC37A3Q8NCC5 494 aa16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 OR10G2Q8NGC3 310 aa16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 OR8D4Q8NGM9 314 aa16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 OR6K6Q8NGW6 343 aa16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 TEX47Q8TBZ9 253 aa16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 CLPTM1LQ96KA5 538 aa16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 COPS4Q9BT78 406 aa16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 ARMC1Q9NVT9 282 aa16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 MRPL22Q9NWU5 206 aaKnown RBP16.77■□□□□ 0.28
SHROOM1-204ENST00000440118 ARHGAP32A7KAX9 2087 aa16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 LOC105371242A0A075B767 164 aa16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 H3BN98 237 aa16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 M0R135 149 aa16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 FOXH1O75593 365 aa16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 IGHV2-70P01814 119 aa16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 FMO3P31513 532 aa16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 RPS27P42677 84 aaKnown RBP16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 MMP16P51512 607 aa16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 PRSS12P56730 875 aa16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 CRMP1Q14194 572 aa16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 LNX2Q8N448 690 aa16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 BCAS4Q8TDM0 211 aa16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 SPRYD4Q8WW59 207 aaPredicted RBP16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 OTULINQ96BN8 352 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms