RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 USP43Q70EL4 1123 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 LINC00346Q8IVM7 164 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 SPICQ8N5J4 248 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 SDR9C7Q8NEX9 313 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 OR52E2Q8NGJ4 325 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 OR13G1Q8NGZ3 307 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 ST7LQ8TDW4 575 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 ZNF418Q8TF45 676 aaPredicted RBP17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 ZNF582Q96NG8 517 aaPredicted RBP17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 DDOQ99489 341 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 SLC30A2Q9BRI3 323 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 FN3KQ9H479 309 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 EGLN3Q9H6Z9 239 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 PATZ1Q9HBE1 687 aaKnown RBP17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 GCM1Q9NP62 436 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 PNRC2Q9NPJ4 139 aaKnown RBP17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 MRPL22Q9NWU5 206 aaKnown RBP17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 A0A1B0GWJ7 208 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 IQCF6A8MYZ5 107 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 TMEM178BH3BS89 294 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 BHLHE40O14503 412 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 FOXH1O75593 365 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 FSHBP01225 129 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 ADRA2CP18825 462 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 ATP6V1B2P21281 511 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 MAGEA2P43356 314 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 MXRA7P84157 204 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 CYP2R1Q6VVX0 501 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 ATG16L2Q8NAA4 619 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 OR10AD1Q8NGE0 317 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 OR9Q2Q8NGE9 314 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 OR4C15Q8NGM1 316 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 MEGF10Q96KG7 1140 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 PITX2Q99697 317 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 BTBD10Q9BSF8 475 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 TRIM15Q9C019 465 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 C7orf69Q9H7B7 122 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 PCDHB10Q9UN67 800 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 POLR3KQ9Y2Y1 108 aaPredicted RBP17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 CDH10Q9Y6N8 788 aa17.09■□□□□ 0.33
NCKIPSD-206ENST00000439518 F5H0A9 414 aaPredicted RBP17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 IFNL4K9M1U5 179 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 TNFRSF11BO00300 401 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 MLNRO43193 412 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 SLC6A9P48067 706 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 MMP16P51512 607 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 HILS1P60008 231 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 CLEC12AQ5QGZ9 265 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 ZNF362Q5T0B9 420 aaPredicted RBP17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 RPL13AP3Q6NVV1 102 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 KLHL36Q8N4N3 616 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 LINC00471Q8N535 108 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 FITM2Q8N6M3 262 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 OR2AJ1Q8NGZ0 328 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 NANPQ8TBE9 248 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 ATF6BQ99941 703 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 CDADC1Q9BWV3 514 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 WDR76Q9H967 626 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 IL20Q9NYY1 176 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 KCNG2Q9UJ96 466 aa17.08■□□□□ 0.32
NCKIPSD-206ENST00000439518 TCRBV5S2A0A599 114 aa17.07■□□□□ 0.32
NCKIPSD-206ENST00000439518 H0YL77 283 aa17.07■□□□□ 0.32
NCKIPSD-206ENST00000439518 RGS9O75916 674 aaPredicted RBP17.07■□□□□ 0.32
NCKIPSD-206ENST00000439518 HLA-DQA2P01906 255 aa17.07■□□□□ 0.32
NCKIPSD-206ENST00000439518 MDH2P40926 338 aaKnown RBP17.07■□□□□ 0.32
NCKIPSD-206ENST00000439518 TRAP1Q12931 704 aaKnown RBP17.07■□□□□ 0.32
NCKIPSD-206ENST00000439518 NAA40Q86UY6 237 aa17.07■□□□□ 0.32
NCKIPSD-206ENST00000439518 CYB561A3Q8NBI2 242 aa17.07■□□□□ 0.32
NCKIPSD-206ENST00000439518 OR8D4Q8NGM9 314 aa17.07■□□□□ 0.32
NCKIPSD-206ENST00000439518 MAP6Q96JE9 813 aa17.07■□□□□ 0.32
NCKIPSD-206ENST00000439518 HCAR1Q9BXC0 346 aa17.07■□□□□ 0.32
NCKIPSD-206ENST00000439518 PLA2G12AQ9BZM1 189 aa17.07■□□□□ 0.32
NCKIPSD-206ENST00000439518 MMP26Q9NRE1 261 aa17.07■□□□□ 0.32
NCKIPSD-206ENST00000439518 B2RBV5 119 aa17.06■□□□□ 0.32
NCKIPSD-206ENST00000439518 F5H5K5 113 aa17.06■□□□□ 0.32
NCKIPSD-206ENST00000439518 GASTP01350 101 aa17.06■□□□□ 0.32
NCKIPSD-206ENST00000439518 SELEP16581 610 aa17.06■□□□□ 0.32
NCKIPSD-206ENST00000439518 PYCR1P32322 319 aa17.06■□□□□ 0.32
NCKIPSD-206ENST00000439518 SRP9P49458 86 aaKnown RBP17.06■□□□□ 0.32
NCKIPSD-206ENST00000439518 SEC61A1P61619 476 aaKnown RBP17.06■□□□□ 0.32
NCKIPSD-206ENST00000439518 GK2Q14410 553 aaPredicted RBP17.06■□□□□ 0.32
NCKIPSD-206ENST00000439518 RASSF6Q6ZTQ3 369 aa17.06■□□□□ 0.32
NCKIPSD-206ENST00000439518 ARHGAP24Q8N264 748 aa17.06■□□□□ 0.32
NCKIPSD-206ENST00000439518 BHLHE23Q8NDY6 225 aa17.06■□□□□ 0.32
NCKIPSD-206ENST00000439518 DEFB108BQ8NET1 73 aa17.06■□□□□ 0.32
NCKIPSD-206ENST00000439518 OR52L1Q8NGH7 329 aa17.06■□□□□ 0.32
NCKIPSD-206ENST00000439518 OR10S1Q8NGN2 331 aa17.06■□□□□ 0.32
NCKIPSD-206ENST00000439518 ZNRF4Q8WWF5 429 aa17.06■□□□□ 0.32
NCKIPSD-206ENST00000439518 A8MXK9 166 aa17.05■□□□□ 0.32
NCKIPSD-206ENST00000439518 F5H5P2 479 aa17.05■□□□□ 0.32
NCKIPSD-206ENST00000439518 TRAPPC2LH3BP13 241 aa17.05■□□□□ 0.32
NCKIPSD-206ENST00000439518 LCN8Q6JVE9 175 aa17.05■□□□□ 0.32
NCKIPSD-206ENST00000439518 OR2T4Q8NH00 348 aa17.05■□□□□ 0.32
NCKIPSD-206ENST00000439518 ZNF420Q8TAQ5 688 aaPredicted RBP17.05■□□□□ 0.32
NCKIPSD-206ENST00000439518 NSL1Q96IY1 281 aa17.05■□□□□ 0.32
NCKIPSD-206ENST00000439518 CCT8L2Q96SF2 557 aa17.05■□□□□ 0.32
NCKIPSD-206ENST00000439518 SUCNR1Q9BXA5 334 aa17.05■□□□□ 0.32
NCKIPSD-206ENST00000439518 MUC13Q9H3R2 512 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms