RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 C5orf49A4QMS7 147 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 SRSF10O75494 262 aaKnown RBP11□□□□□ -0.65
SCLT1-202ENST00000439369 CD1AP06126 327 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 ACSM4P0C7M7 580 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 CECR9P0C854 216 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 SMIM18P0DKX4 95 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 JUNBP17275 347 aaPredicted RBP11□□□□□ -0.65
SCLT1-202ENST00000439369 GRNP28799 593 aaKnown RBP11□□□□□ -0.65
SCLT1-202ENST00000439369 ZNF83P51522 516 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 NR1H2P55055 460 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 GPR50Q13585 617 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 OR2G6Q5TZ20 316 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 RPL22L1Q6P5R6 122 aaKnown RBP11□□□□□ -0.65
SCLT1-202ENST00000439369 COLCA1Q6ZS62 124 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 SPATC1Q76KD6 591 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 DMRTC2Q8IXT2 367 aaPredicted RBP11□□□□□ -0.65
SCLT1-202ENST00000439369 ZNF283Q8N7M2 679 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 OR52H1Q8NGJ2 320 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 RPS4Y2Q8TD47 263 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 SPRYD4Q8WW59 207 aaPredicted RBP11□□□□□ -0.65
SCLT1-202ENST00000439369 RORBQ92753 470 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 RADILQ96JH8 1075 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 SPOCK3Q9BQ16 436 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 C1QTNF5Q9BXJ0 243 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 ESRP2Q9H6T0 727 aaKnown RBP11□□□□□ -0.65
SCLT1-202ENST00000439369 ISG20L2Q9H9L3 353 aaKnown RBP11□□□□□ -0.65
SCLT1-202ENST00000439369 CDH20Q9HBT6 801 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 ACOXLQ9NUZ1 547 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 TBCCD1Q9NVR7 557 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 NPAP1Q9NZP6 1156 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 EIF3KQ9UBQ5 218 aaKnown RBP11□□□□□ -0.65
SCLT1-202ENST00000439369 NUFIP1Q9UHK0 495 aaKnown RBP11□□□□□ -0.65
SCLT1-202ENST00000439369 ZNF391Q9UJN7 358 aa11□□□□□ -0.65
SCLT1-202ENST00000439369 TMEM269A0A1B0GVZ9 245 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 F5H5K5 113 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 LOC110117498-PIK3R3F6TDL0 507 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 PYCARD-AS1I3L0S3 204 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 M0R1B8 84 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 PSMD9O00233 223 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 CASKO14936 926 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 OGG1O15527 345 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 CLPTM1O96005 669 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 CRYAAP02489 173 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 ZNF35P13682 527 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 CD53P19397 219 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 CD40P25942 277 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 KIR2DL3P43628 341 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 MAP2K4P45985 399 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 CX3CR1P49238 355 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 PRKXP51817 358 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 GALK2Q01415 458 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 NAAAQ02083 359 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 MLLT11Q13015 90 aaPredicted RBP10.99□□□□□ -0.65
SCLT1-202ENST00000439369 MED22Q15528 200 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 BEX5Q5H9J7 111 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 XAF1Q6GPH4 301 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 C22orf34Q6ZV56 151 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 KCTD8Q6ZWB6 473 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 PRSS45Q7RTY3 260 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 WFDC8Q8IUA0 241 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 OR2G2Q8NGZ5 317 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 GATAD2BQ8WXI9 593 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 APOBEC3DQ96AK3 386 aaPredicted RBP10.99□□□□□ -0.65
SCLT1-202ENST00000439369 MS4A3Q96HJ5 214 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 MGLLQ99685 303 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 KCNS3Q9BQ31 491 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 TTTY10Q9BZA0 68 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 RGCCQ9H4X1 137 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 OPA3Q9H6K4 179 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 FAM206AQ9NX38 181 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 SCOCQ9UIL1 159 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 SPEF1Q9Y4P9 236 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 HCFC1P51610 2035 aa10.99□□□□□ -0.65
SCLT1-202ENST00000439369 UBR5O95071 2799 aaPredicted RBP10.99□□□□□ -0.65
SCLT1-202ENST00000439369 DIDO1Q9BTC0 2240 aaKnown RBP10.99□□□□□ -0.65
SCLT1-202ENST00000439369 PCNX1Q96RV3 2341 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 IGHV2OR16-5A0A0B4J2B6 119 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 A0A0U1RQV5 110 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 H3BSA7 217 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 MAGEB4O15481 346 aaPredicted RBP10.98□□□□□ -0.65
SCLT1-202ENST00000439369 CELA3BP08861 270 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 DBHP09172 617 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 CFL1P23528 166 aaKnown RBP10.98□□□□□ -0.65
SCLT1-202ENST00000439369 RAD52P43351 418 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 ZNF121P58317 390 aaPredicted RBP10.98□□□□□ -0.65
SCLT1-202ENST00000439369 TPBGQ13641 420 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 ALKBH1Q13686 389 aaKnown RBP10.98□□□□□ -0.65
SCLT1-202ENST00000439369 NCMAPQ5T1S8 102 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 SYT6Q5T7P8 510 aaPredicted RBP10.98□□□□□ -0.65
SCLT1-202ENST00000439369 BCL2L15Q5TBC7 163 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 ZNF704Q6ZNC4 412 aaPredicted RBP10.98□□□□□ -0.65
SCLT1-202ENST00000439369 CATSPERDQ86XM0 798 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 KLBQ86Z14 1044 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 ELMOD2Q8IZ81 293 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 CCDC54Q8NEL0 328 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 OR5L1Q8NGL2 311 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 MUL1Q969V5 352 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 RNF166Q96A37 237 aaPredicted RBP10.98□□□□□ -0.65
SCLT1-202ENST00000439369 C4orf45Q96LM5 186 aa10.98□□□□□ -0.65
SCLT1-202ENST00000439369 OR5M11Q96RB7 305 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms