RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 DISC1C4P0D8 188 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 ZNF823P16415 610 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 FBLP22087 321 aaKnown RBP14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 ZP4Q12836 540 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 ZNF273Q14593 569 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 NSDHLQ15738 373 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 ZNF260Q3ZCT1 412 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 PRAMEF17Q5VTA0 474 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 TMEM244Q5VVB8 128 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 JMJD6Q6NYC1 403 aaPredicted RBP14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 DNM1P34Q6PK57 102 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 DEGS2Q6QHC5 323 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 ARSKQ6UWY0 536 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 C17orf107Q6ZR85 190 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 PXT1Q8NFP0 134 aa14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 MRPS24Q96EL2 167 aaKnown RBP14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 MYEF2Q9P2K5 600 aaKnown RBP14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 GPN3Q9UHW5 284 aaPredicted RBP14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 FARSAQ9Y285 508 aaKnown RBP14.63□□□□□ -0.07
CLCNKA-203ENST00000439316 IGHV1OR21-1A0A087WYE8 117 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 A0A1B0GW55 424 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 MS4A18H0YCH9 400 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 OR2F2O95006 317 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 DUX4L2P0CJ85 424 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 DUX4L3P0CJ86 424 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 DUX4L4P0CJ87 422 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 DUX4L5P0CJ88 424 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 DUX4L6P0CJ89 424 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 DUX4L7P0CJ90 424 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 CTRB1P17538 263 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 ZBTB25P24278 435 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 FMODQ06828 376 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 OR2F1Q13607 317 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 ZMYND11Q15326 602 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 MS4A18Q3C1V0 323 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 SCGB2B2Q4G0G5 96 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 VWA2Q5GFL6 755 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 PEAR1Q5VY43 1037 aaPredicted RBP14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 CTRB2Q6GPI1 263 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 RAB12Q6IQ22 244 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 LRFN4Q6PJG9 635 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 SLC25A42Q86VD7 318 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 LINC00346Q8IVM7 164 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 ACBD4Q8NC06 268 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 RELL2Q8NC24 303 aaPredicted RBP14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 OR1L3Q8NH93 324 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 PRRT1Q99946 306 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 C12orf4Q9NQ89 552 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 DUX4Q9UBX2 424 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 RAB22AQ9UL26 194 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 GPR179Q6PRD1 2367 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 LOC101059948A0A1B0GTJ6 334 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 TMEM269A0A1B0GVZ9 245 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 CPED1A4D0V7 1026 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 RAB27BO00194 218 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 P2RY10O00398 339 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 BCL2L11O43521 198 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 IL2RAP01589 272 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 HLA-AP01891 365 aaKnown RBP14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 HLA-GP17693 338 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 SQSTM1Q13501 440 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 LPAL2Q16609 132 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 C11orf87Q6NUJ2 197 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 LYG2Q86SG7 212 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 FJX1Q86VR8 437 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 WDFY1Q8IWB7 410 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 KDM8Q8N371 416 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 ZNF248Q8NDW4 579 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 OR4S1Q8NGB4 309 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 SAP25Q8TEE9 199 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 RELTQ969Z4 430 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 MRGPRFQ96AM1 343 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 ZBTB8AQ96BR9 441 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 KCNK17Q96T54 332 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 DNTTIP1Q9H147 329 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 WDR13Q9H1Z4 485 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 GAREM1Q9H706 876 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 BARX1Q9HBU1 254 aaPredicted RBP14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 PRELID1Q9Y255 219 aa14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 NOP16Q9Y3C1 178 aaKnown RBP14.62□□□□□ -0.07
CLCNKA-203ENST00000439316 METTL21EPA6NDL7 271 aa14.61□□□□□ -0.07
CLCNKA-203ENST00000439316 NPIPB13A6NJU9 1138 aa14.61□□□□□ -0.07
CLCNKA-203ENST00000439316 NPIPB4C9JG80 1138 aa14.61□□□□□ -0.07
CLCNKA-203ENST00000439316 DAP3P51398 398 aaKnown RBP14.61□□□□□ -0.07
CLCNKA-203ENST00000439316 HSD11B2P80365 405 aa14.61□□□□□ -0.07
CLCNKA-203ENST00000439316 CFHR1Q03591 330 aa14.61□□□□□ -0.07
CLCNKA-203ENST00000439316 RNASE10Q5GAN6 216 aaKnown RBP14.61□□□□□ -0.07
CLCNKA-203ENST00000439316 LIN54Q6MZP7 749 aa14.61□□□□□ -0.07
CLCNKA-203ENST00000439316 PRSS58Q8IYP2 241 aa14.61□□□□□ -0.07
CLCNKA-203ENST00000439316 ZDHHC22Q8N966 263 aa14.61□□□□□ -0.07
CLCNKA-203ENST00000439316 OR2I1PQ8NGU4 316 aa14.61□□□□□ -0.07
CLCNKA-203ENST00000439316 RNF133Q8WVZ7 376 aa14.61□□□□□ -0.07
CLCNKA-203ENST00000439316 VN1R1Q9GZP7 353 aa14.61□□□□□ -0.07
CLCNKA-203ENST00000439316 CNTD2Q9H8S5 307 aa14.61□□□□□ -0.07
CLCNKA-203ENST00000439316 ZNF304Q9HCX3 659 aa14.61□□□□□ -0.07
CLCNKA-203ENST00000439316 IGKV1D-43A0A0B4J1Z2 117 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 KANTRA0A1W2PQU2 76 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 NPIPA5E9PKD4 350 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 CSN2P05814 226 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 HSD11B1P28845 292 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms