RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 CA13Q8N1Q1 262 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF561Q8N587 486 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 EID2Q8N6I1 236 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 CLDN22Q8N7P3 220 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF740Q8NDX6 193 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 GPR32P1Q8NGA4 272 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR1J1Q8NGS3 322 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF502Q8TBZ5 544 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 FBXO25Q8TCJ0 367 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 HAVCR2Q8TDQ0 301 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 CASTOR1Q8WTX7 329 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 RERGQ96A58 199 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR10C1Q96KK4 312 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 TMEM56Q96MV1 263 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 OLFM3Q96PB7 478 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR5B12Q96R08 314 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 PHB2Q99623 299 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 AGMATQ9BSE5 352 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 BOLA2Q9H3K6 86 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 RBKSQ9H477 322 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 C3orf14Q9HBI5 128 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZBTB20Q9HC78 741 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 AMBNQ9NP70 447 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 ACOT13Q9NPJ3 140 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 TIGARQ9NQ88 270 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 FBXO6Q9NRD1 293 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 B3GNT2Q9NY97 397 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 TREM2Q9NZC2 230 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 GLTPQ9NZD2 209 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 CD84Q9UIB8 345 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 RWDD2AQ9UIY3 292 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 FBXO5Q9UKT4 447 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 TMCO1Q9UM00 188 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 ALG5Q9Y673 324 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 TMEM56-RWDD3S4R434 201 aa3.03□□□□□ -1.92
HMGB1P12-201ENST00000438594 PTPRGP23470 1445 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 ARHGEF10O15013 1369 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 NRCAMQ92823 1304 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 COL22A1Q8NFW1 1626 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 BIVM-ERCC5R4GMW8 1640 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 TRBV5-3A0A0A0MS03 114 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 TRBV4-1A0A0J9YWV2 114 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 LOC101059948A0A1B0GTJ6 334 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 USP27XA6NNY8 438 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 H7C0C1 242 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 CDC7O00311 574 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 CCL21O00585 134 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 MRPS12O15235 138 aaKnown RBP3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 TCAPO15273 167 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 SPRY3O43610 288 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 PRKYO43930 277 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 SLC16A7O60669 478 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 ENTPD6O75354 484 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 DCTN3O75935 186 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 GCGP01275 180 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 CD8AP01732 235 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 CRYAAP02489 173 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 MT-ND4P03905 459 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 RLN2P04090 185 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 HCKP08631 526 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 HOXC4P09017 264 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 FGF2P09038 288 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 SCGB1A1P11684 91 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 TBPP20226 339 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 IGFBP5P24593 272 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 MT3P25713 68 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 HTR1DP28221 377 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 RPL3P39023 403 aaKnown RBP3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 GSSP48637 474 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 SSR4P51571 173 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 SEC61A1P61619 476 aaKnown RBP3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 RPL32P62910 135 aaKnown RBP3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 IL5RAQ01344 420 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 SP4Q02446 784 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 SRSF9Q13242 221 aaKnown RBP eCLIP3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 GTF2H2Q13888 395 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 KIAA0141Q14154 515 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 ZNF234Q14588 700 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 IRF4Q15306 451 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 TRAM1Q15629 374 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 CD226Q15762 336 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 CALCRLQ16602 461 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 C4orf26Q17RF5 130 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 PVRIGQ6DKI7 326 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 OR52E8Q6IFG1 317 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 TYW3Q6IPR3 259 aaKnown RBP3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 GTF2H2CQ6P1K8 395 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 ADAMTSL5Q6ZMM2 481 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 C3orf62Q6ZUJ4 267 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 FAM57BQ71RH2 274 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 PRSS48Q7RTY5 328 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 SLC36A1Q7Z2H8 476 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 FAM19A5Q7Z5A7 132 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 ZNF554Q86TJ5 538 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 NIT1Q86X76 327 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 SLC30A8Q8IWU4 369 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 OR4N5Q8IXE1 308 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 CPNE9Q8IYJ1 553 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 BPIFB2Q8N4F0 458 aa3.02□□□□□ -1.93
HMGB1P12-201ENST00000438594 TCEANCQ8N8B7 351 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms