RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 OR52N1Q8NH53 320 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 PIK3IP1Q96FE7 263 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 C4orf45Q96LM5 186 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 ZNF649Q9BS31 505 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 RHNO1Q9BSD3 238 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 SLCO1C1Q9NYB5 712 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 PCDHGB5Q9Y5G0 923 aa15.92■□□□□ 0.14
HDAC6-208ENST00000438518 COL12A1Q99715 3063 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 H3BSA7 217 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 MYL12BO14950 172 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 SIAH2O43255 324 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 TNFAIP8O95379 198 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 LIMS3P0CW19 117 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 LIMS4P0CW20 117 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 LOXP28300 417 aaPredicted RBP15.91■□□□□ 0.14
HDAC6-208ENST00000438518 CALCRP30988 508 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 CX3CR1P49238 355 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 MMP16P51512 607 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 UCP2P55851 309 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 RSPO1Q2MKA7 263 aaPredicted RBP15.91■□□□□ 0.14
HDAC6-208ENST00000438518 ADAM5Q6NVV9 412 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 ZNF544Q6NX49 715 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 SLC22A25Q6T423 547 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 COLCA1Q6ZS62 124 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 SPATC1Q76KD6 591 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 LHFPL3Q86UP9 236 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 KLHL36Q8N4N3 616 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 RFLNBQ8N5W9 214 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 ZNF283Q8N7M2 679 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 OR5L1Q8NGL2 311 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 APOBEC3DQ96AK3 386 aaPredicted RBP15.91■□□□□ 0.14
HDAC6-208ENST00000438518 SIGLEC11Q96RL6 698 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 C1QTNF5Q9BXJ0 243 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 MRM2Q9UI43 246 aaKnown RBP15.91■□□□□ 0.14
HDAC6-208ENST00000438518 ERGIC3Q9Y282 383 aa15.91■□□□□ 0.14
HDAC6-208ENST00000438518 LRRK2Q5S007 2527 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 GCN1Q92616 2671 aaKnown RBP15.9■□□□□ 0.14
HDAC6-208ENST00000438518 VSTM5A8MXK1 200 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 SMPD2O60906 423 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 MT-ND5P03915 603 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 DBHP09172 617 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 CCL2P13500 99 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 NR4A1P22736 598 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 EEF1B2P24534 225 aaKnown RBP15.9■□□□□ 0.14
HDAC6-208ENST00000438518 GLRXP35754 106 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 SLC6A9P48067 706 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 CHN2P52757 468 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 LIPNQ5VXI9 398 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 YIPF7Q8N8F6 280 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 OR52H1Q8NGJ2 320 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 ITFG2Q969R8 447 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 NR1H4Q96RI1 486 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-208ENST00000438518 MND1Q9BWT6 205 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 OPA3Q9H6K4 179 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 ZNF442Q9H7R0 627 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 PAK1IP1Q9NWT1 392 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-208ENST00000438518 ZNF391Q9UJN7 358 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 POU2F3Q9UKI9 436 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 GRIP1Q9Y3R0 1128 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 R4GMQ9 66 aa15.9■□□□□ 0.14
HDAC6-208ENST00000438518 TMEM269A0A1B0GVZ9 245 aa15.89■□□□□ 0.13
HDAC6-208ENST00000438518 TRIM64A6NGJ6 449 aa15.89■□□□□ 0.13
HDAC6-208ENST00000438518 PRR32B1ATL7 298 aa15.89■□□□□ 0.13
HDAC6-208ENST00000438518 ATP6V1G2-DDX39BF2Z307 99 aa15.89■□□□□ 0.13
HDAC6-208ENST00000438518 RPSAP08865 295 aaKnown RBP15.89■□□□□ 0.13
HDAC6-208ENST00000438518 C21orf33P30042 268 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-208ENST00000438518 ETV1P50549 477 aa15.89■□□□□ 0.13
HDAC6-208ENST00000438518 PRKXP51817 358 aa15.89■□□□□ 0.13
HDAC6-208ENST00000438518 NKX6-1P78426 367 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-208ENST00000438518 ZNF704Q6ZNC4 412 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-208ENST00000438518 PAQR4Q8N4S7 273 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-208ENST00000438518 SLC7A6Q92536 515 aa15.89■□□□□ 0.13
HDAC6-208ENST00000438518 C4orf36Q96KX1 117 aa15.89■□□□□ 0.13
HDAC6-208ENST00000438518 TTTY10Q9BZA0 68 aa15.89■□□□□ 0.13
HDAC6-208ENST00000438518 GNG8Q9UK08 70 aa15.89■□□□□ 0.13
HDAC6-208ENST00000438518 SNX5Q9Y5X3 404 aa15.89■□□□□ 0.13
HDAC6-208ENST00000438518 HEATR1Q9H583 2144 aaKnown RBP15.89■□□□□ 0.13
HDAC6-208ENST00000438518 SHISA9B4DS77 424 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 LOC110117498-PIK3R3F6TDL0 507 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 PSMD9O00233 223 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 LCATP04180 440 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 ANXA2P07355 339 aaKnown RBP15.88■□□□□ 0.13
HDAC6-208ENST00000438518 WNT5AP41221 380 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 WNT4P56705 351 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 ZNF121P58317 390 aaPredicted RBP15.88■□□□□ 0.13
HDAC6-208ENST00000438518 TLE4Q04727 773 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 SPOCK1Q08629 439 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 SNTB2Q13425 540 aaKnown RBP15.88■□□□□ 0.13
HDAC6-208ENST00000438518 CCDC58Q4VC31 144 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 TP53I3Q53FA7 332 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 FDX2Q6P4F2 183 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 PRSS45Q7RTY3 260 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 SVOPQ8N4V2 548 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 NANOGP1Q8N7R0 232 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 KBTBD8Q8NFY9 601 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 ABHD4Q8TB40 342 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 CCDC90BQ9GZT6 254 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 RGCCQ9H4X1 137 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 CA10Q9NS85 328 aa15.88■□□□□ 0.13
HDAC6-208ENST00000438518 ACOXLQ9NUZ1 547 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms