RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 SLC7A2P52569 658 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 LSM6P62312 80 aaKnown RBP6.53□□□□□ -1.36
VPS50-204ENST00000438395 GNB2P62879 340 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 IL13RA1P78552 427 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 MALLQ13021 153 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 KRT72Q14CN4 511 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 MESTQ5EB52 335 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 JAZF1Q86VZ6 243 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 LRRC28Q86X40 367 aaPredicted RBP6.53□□□□□ -1.36
VPS50-204ENST00000438395 POU5F2Q8N7G0 328 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 ZDHHC22Q8N966 263 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 FAM156AQ8NDB6 213 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 BHLHE23Q8NDY6 225 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 OR8B3Q8NGG8 313 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 OR52E2Q8NGJ4 325 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 OR11L1Q8NGX0 322 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 FANK1Q8TC84 345 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 DVL3Q92997 716 aaPredicted RBP6.53□□□□□ -1.36
VPS50-204ENST00000438395 PTP4A1Q93096 173 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 APOBEC3DQ96AK3 386 aaPredicted RBP6.53□□□□□ -1.36
VPS50-204ENST00000438395 HAVCR1Q96D42 359 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 RSRC1Q96IZ7 334 aaKnown RBP6.53□□□□□ -1.36
VPS50-204ENST00000438395 OR8B2Q96RD0 313 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 KCTD14Q9BQ13 255 aaPredicted RBP6.53□□□□□ -1.36
VPS50-204ENST00000438395 ZNF747Q9BV97 191 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 HDHD2Q9H0R4 259 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 NMNAT1Q9HAN9 279 aaPredicted RBP6.53□□□□□ -1.36
VPS50-204ENST00000438395 MMP26Q9NRE1 261 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 DCAF16Q9NXF7 216 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 PTTG3PQ9NZH4 202 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 ZNF69Q9UC07 566 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 MIOXQ9UGB7 285 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 KLHL21Q9UJP4 597 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 RPS6KA6Q9UK32 745 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 STARD10Q9Y365 291 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 NOP16Q9Y3C1 178 aaKnown RBP6.53□□□□□ -1.36
VPS50-204ENST00000438395 INSIG2Q9Y5U4 225 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 ENPP4Q9Y6X5 453 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 A0A087WUU8 490 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 TRAV40A0A0B4J280 105 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 A8MXK9 166 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 TMEM178BH3BS89 294 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 CDC42EP2O14613 210 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 CCDC22O60826 627 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 RENP00797 406 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 CRYBA1P05813 215 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 EGR1P18146 543 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 CRABP1P29762 137 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 SLC6A9P48067 706 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 PITPNBP48739 271 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 RAD23AP54725 363 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 SLC36A3Q495N2 470 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 HSP90B2PQ58FF3 399 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 SPRNQ5BIV9 151 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 TMEM255AQ5JRV8 349 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 OR2T2Q6IF00 324 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 LRRN1Q6UXK5 716 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 TMPRSS11FQ6ZWK6 438 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 CBLL1Q75N03 491 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 SPATC1Q76KD6 591 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 PARP8Q8N3A8 854 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 LRRC75AQ8NAA5 344 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 GJC3Q8NFK1 279 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 OR8G5Q8NG78 346 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 OR2AJ1Q8NGZ0 328 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 RP9Q8TA86 221 aaKnown RBP6.52□□□□□ -1.37
VPS50-204ENST00000438395 SLC7A6Q92536 515 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 NEIL1Q96FI4 390 aaPredicted RBP6.52□□□□□ -1.37
VPS50-204ENST00000438395 HOPXQ9BPY8 73 aaPredicted RBP6.52□□□□□ -1.37
VPS50-204ENST00000438395 CDADC1Q9BWV3 514 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 MMADHCQ9H3L0 296 aaPredicted RBP6.52□□□□□ -1.37
VPS50-204ENST00000438395 POFUT1Q9H488 388 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 GCM1Q9NP62 436 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 ARMCX1Q9P291 453 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 CLN8Q9UBY8 286 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 COA3Q9Y2R0 106 aaPredicted RBP6.52□□□□□ -1.37
VPS50-204ENST00000438395 SNX13Q9Y5W8 968 aa6.52□□□□□ -1.37
VPS50-204ENST00000438395 IGHV3OR16-10A0A075B7F0 116 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 IGHV3-64DA0A0J9YX35 117 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 A0A1W2PRQ8 180 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 UNC119BA6NIH7 251 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 F5H0A9 414 aaPredicted RBP6.51□□□□□ -1.37
VPS50-204ENST00000438395 TRAPPC2LH3BP13 241 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 FFAR1O14842 300 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 RER1O15258 196 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 ZNF205O95201 554 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 GPANK1O95872 356 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 CYB5R3P00387 301 aaPredicted RBP6.51□□□□□ -1.37
VPS50-204ENST00000438395 HLA-DQA2P01906 255 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 SCG5P05408 212 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 RNASE1P07998 156 aaKnown RBP6.51□□□□□ -1.37
VPS50-204ENST00000438395 COX4I1P13073 169 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 FPR3P25089 353 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 SLC6A6P31641 620 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 NUDT2P50583 147 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 SMIM11AP58511 58 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 SEC61A1P61619 476 aaKnown RBP6.51□□□□□ -1.37
VPS50-204ENST00000438395 ECH1Q13011 328 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 DGCR6Q14129 220 aa6.51□□□□□ -1.37
VPS50-204ENST00000438395 HLXQ14774 488 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms