RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 SLC38A6Q8IZM9 456 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 LRRC18Q8N456 261 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 ESX1Q8N693 406 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 CLRN3Q8NCR9 226 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 TMEM52Q8NDY8 209 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 NUDT9Q9BW91 350 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 TAF9BQ9HBM6 251 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF286AQ9HBT8 521 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.03□□□□□ -1.44
CSDE1-205ENST00000438362 SMCO4Q9NRQ5 59 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 SCRG1O75711 98 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 SYNGR4O95473 234 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 RECKO95980 971 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 LAP3P28838 519 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 HOXC12P31275 282 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 ECI1P42126 302 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 EFNA3P52797 238 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 PPP1CAP62136 330 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF117Q03924 483 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 TOMM34Q15785 309 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-205ENST00000438362 Q5BKY6 102 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 ALKBH2Q6NS38 261 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 RFLNBQ8N5W9 214 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 DTWD2Q8NBA8 298 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 SUMF2Q8NBJ7 301 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 PIGTQ969N2 578 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 CXorf58Q96LI9 332 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 LINC00052Q96N35 136 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 TCEAL7Q9BRU2 100 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 PBOV1Q9GZY1 135 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 GPR84Q9NQS5 396 aa6.03□□□□□ -1.44
CSDE1-205ENST00000438362 TRAV8-7A0A075B6U6 113 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 A0A1W2PPC4 97 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 STMND1H3BQB6 276 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 SGCEO43556 437 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 B3GALNT1O75752 331 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 EPPINO95925 133 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 CD1AP06126 327 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 GSTP1P09211 210 aaKnown RBP6.02□□□□□ -1.45
CSDE1-205ENST00000438362 ZNF728P0DKX0 622 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 RPA2P15927 270 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 EIF1P41567 113 aaKnown RBP6.02□□□□□ -1.45
CSDE1-205ENST00000438362 AFF3P51826 1226 aaKnown RBP6.02□□□□□ -1.45
CSDE1-205ENST00000438362 TMEM88Q6PEY1 159 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 ATG4DQ86TL0 474 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-205ENST00000438362 PPP1R3BQ86XI6 285 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 CCDC54Q8NEL0 328 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 GJC3Q8NFK1 279 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 OR10Z1Q8NGY1 313 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 TERB2Q8NHR7 220 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 GPBAR1Q8TDU6 330 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 RRNAD1Q96FB5 475 aaKnown RBP6.02□□□□□ -1.45
CSDE1-205ENST00000438362 PFDN5Q99471 154 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 C1QTNF6Q9BXI9 259 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 CYB5R1Q9UHQ9 305 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 TSC2P49815 1807 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 SPAG17Q6Q759 2223 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 LOC102725191A0A1B0GVB3 256 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 OR6C76A6NM76 312 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 SDCBPO00560 298 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-205ENST00000438362 OR7C1O76099 320 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-205ENST00000438362 IFNA1P01562 189 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 POU2F2P09086 479 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 DBHP09172 617 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 EN2P19622 333 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-205ENST00000438362 COL9A1P20849 921 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 DPP4P27487 766 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 CHATP28329 748 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 NANOS3P60323 173 aaKnown RBP6.02□□□□□ -1.45
CSDE1-205ENST00000438362 DCDP81605 110 aaKnown RBP6.02□□□□□ -1.45
CSDE1-205ENST00000438362 CD226Q15762 336 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 THEM4Q5T1C6 240 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 OR52W1Q6IF63 320 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 OR2W3Q7Z3T1 314 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 CDC20BQ86Y33 519 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 ZDHHC22Q8N966 263 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 OR11G2Q8NGC1 345 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 OR11H4Q8NGC9 324 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 OR10AC1Q8NH08 325 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 SLC25A43Q8WUT9 341 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-205ENST00000438362 SLAMF9Q96A28 289 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 WWTR1Q9GZV5 400 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 TMEM231Q9H6L2 316 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 ZFP64Q9NPA5 681 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 PCOLCE2Q9UKZ9 415 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 ZMIZ1Q9ULJ6 1067 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 KCNS2Q9ULS6 477 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 LILRA5A6NI73 299 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 HRKO00198 91 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 TAAR5O14804 337 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 TXNL1O43396 289 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 ALOX12BO75342 701 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 SERPINE2P07093 398 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 CTLA4P16410 223 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 GABRG2P18507 467 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 CD80P33681 288 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 DUSP3P51452 185 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-205ENST00000438362 LBX1P52954 281 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 EPHA4P54764 986 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms