RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 NDUFB11Q9NX14 153 aa15.58■□□□□ 0.08
PTPRF-209ENST00000438120 TRAF3IP2O43734 574 aaPredicted RBP15.58■□□□□ 0.08
PTPRF-209ENST00000438120 NME2P1O60361 137 aa15.58■□□□□ 0.08
PTPRF-209ENST00000438120 FUCA1P04066 466 aa15.58■□□□□ 0.08
PTPRF-209ENST00000438120 GPR12P47775 334 aa15.58■□□□□ 0.08
PTPRF-209ENST00000438120 BAGE3Q86Y29 109 aa15.58■□□□□ 0.08
PTPRF-209ENST00000438120 BAGE2Q86Y30 109 aa15.58■□□□□ 0.08
PTPRF-209ENST00000438120 KLHDC8BQ8IXV7 354 aa15.58■□□□□ 0.08
PTPRF-209ENST00000438120 SPEM1Q8N4L4 309 aa15.58■□□□□ 0.08
PTPRF-209ENST00000438120 NIPSNAP3BQ9BS92 247 aa15.58■□□□□ 0.08
PTPRF-209ENST00000438120 SLCO1C1Q9NYB5 712 aa15.58■□□□□ 0.08
PTPRF-209ENST00000438120 PLA2G3Q9NZ20 509 aa15.58■□□□□ 0.08
PTPRF-209ENST00000438120 KIAA0100Q14667 2235 aaKnown RBP15.58■□□□□ 0.08
PTPRF-209ENST00000438120 C2orf76Q3KRA6 126 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 PRSS36Q5K4E3 855 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 SLC38A9Q8NBW4 561 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 TSTD3H0UI37 97 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 GABRG1Q8N1C3 465 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 ST8SIA1Q92185 356 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 FYTTD1Q96QD9 318 aaKnown RBP15.57■□□□□ 0.08
PTPRF-209ENST00000438120 ABCD4O14678 606 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 FZD6O60353 706 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 TMEM104Q8NE00 496 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 AKR7LQ8NHP1 331 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 ALKBH3Q96Q83 286 aaPredicted RBP15.57■□□□□ 0.08
PTPRF-209ENST00000438120 SPTY2D1-AS1A0A0U1RR47 76 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 EPHA2P29317 976 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 CMTM4Q8IZR5 234 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 C15orf54Q8N8G6 183 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 OR2AE1Q8NHA4 323 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 PLA2G2FQ9BZM2 168 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 S1PR5Q9H228 398 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 SERGEFQ9UGK8 458 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 POMT2Q9UKY4 750 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 POLDIP2Q9Y2S7 368 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 LHFPL2Q6ZUX7 228 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 SARGQ9BW04 601 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 TXNIPQ9H3M7 391 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 MRPL22Q9NWU5 206 aaKnown RBP15.57■□□□□ 0.08
PTPRF-209ENST00000438120 RNF150Q9ULK6 438 aa15.57■□□□□ 0.08
PTPRF-209ENST00000438120 A0A087WV62 115 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 FRG2CA6NGY1 282 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 F6UZH7 168 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 XRCC3O43542 346 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 SSSCA1O60232 199 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 ACKR3P25106 362 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 SLC22A20A6NK97 555 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 BHLHE40O14503 412 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 Q6ZRG5 221 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 EXD3Q8N9H8 876 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 TERB2Q8NHR7 220 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 ARPC4-TTLL3A0A0A6YYG9 625 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 IAPPP10997 89 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 DUSP1P28562 367 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 NDUFA6P56556 154 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 YBX1P67809 324 aaKnown RBP15.56■□□□□ 0.08
PTPRF-209ENST00000438120 SHBQ15464 509 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 SLC7A6Q92536 515 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 GABARAPL1Q9H0R8 117 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 ISYNA1Q9NPH2 558 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 SLC17A4Q9Y2C5 497 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 TOGARAM1Q9Y4F4 1720 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 METTL12A8MUP2 240 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 SPRY1O43609 319 aaPredicted RBP15.56■□□□□ 0.08
PTPRF-209ENST00000438120 SEMG1P04279 462 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 PNLIPRP2P54317 469 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 RAC1P63000 192 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 GLCCI1Q86VQ1 547 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 GAB2Q9UQC2 676 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 A0A1B0GUL6 1792 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 ST8SIA3O43173 380 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 RAB13P51153 203 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 KCNE4Q8WWG9 221 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 ADAM19Q9H013 955 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 A3GALT2U3KPV4 340 aa15.56■□□□□ 0.08
PTPRF-209ENST00000438120 PMS2P1A4D2B8 440 aa15.55■□□□□ 0.08
PTPRF-209ENST00000438120 FLI1Q01543 452 aaPredicted RBP15.55■□□□□ 0.08
PTPRF-209ENST00000438120 HYAL1Q12794 435 aa15.55■□□□□ 0.08
PTPRF-209ENST00000438120 SLC25A26Q70HW3 274 aa15.55■□□□□ 0.08
PTPRF-209ENST00000438120 OR13C8Q8NGS7 320 aa15.55■□□□□ 0.08
PTPRF-209ENST00000438120 R4GMQ9 66 aa15.55■□□□□ 0.08
PTPRF-209ENST00000438120 HYAL3O43820 417 aaPredicted RBP15.55■□□□□ 0.08
PTPRF-209ENST00000438120 ZNF121P58317 390 aaPredicted RBP15.55■□□□□ 0.08
PTPRF-209ENST00000438120 CPEB3Q8NE35 698 aaKnown RBP15.55■□□□□ 0.08
PTPRF-209ENST00000438120 MITD1Q8WV92 249 aa15.55■□□□□ 0.08
PTPRF-209ENST00000438120 MRGPRX4Q96LA9 322 aa15.55■□□□□ 0.08
PTPRF-209ENST00000438120 TXN2Q99757 166 aa15.55■□□□□ 0.08
PTPRF-209ENST00000438120 NUDT9Q9BW91 350 aa15.55■□□□□ 0.08
PTPRF-209ENST00000438120 GDF2Q9UK05 429 aaPredicted RBP15.55■□□□□ 0.08
PTPRF-209ENST00000438120 PIAS2O75928 621 aa15.55■□□□□ 0.08
PTPRF-209ENST00000438120 SNRPNP63162 240 aaKnown RBP15.55■□□□□ 0.08
PTPRF-209ENST00000438120 TMEM41BQ5BJD5 291 aa15.55■□□□□ 0.08
PTPRF-209ENST00000438120 TMEM200CA6NKL6 621 aa15.55■□□□□ 0.08
PTPRF-209ENST00000438120 DFFBO76075 338 aa15.55■□□□□ 0.08
PTPRF-209ENST00000438120 TSPAN12O95859 305 aa15.55■□□□□ 0.08
PTPRF-209ENST00000438120 HLA-HP01893 362 aa15.55■□□□□ 0.08
PTPRF-209ENST00000438120 TOR2AQ5JU69 321 aa15.55■□□□□ 0.08
PTPRF-209ENST00000438120 CD276Q5ZPR3 534 aa15.55■□□□□ 0.08
PTPRF-209ENST00000438120 CISD2Q8N5K1 135 aaKnown RBP15.55■□□□□ 0.08
PTPRF-209ENST00000438120 TXNDC12O95881 172 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms