RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 EGR1P18146 543 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 NOS3P29474 1203 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 CRABP1P29762 137 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 SLC6A9P48067 706 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 PITPNBP48739 271 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 RAD23AP54725 363 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 SLC36A3Q495N2 470 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 HSP90B2PQ58FF3 399 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 SPRNQ5BIV9 151 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 TMEM255AQ5JRV8 349 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 OR2T2Q6IF00 324 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 LRRN1Q6UXK5 716 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 TMPRSS11FQ6ZWK6 438 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 SPATC1Q76KD6 591 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 PARP8Q8N3A8 854 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 LRRC75AQ8NAA5 344 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 GJC3Q8NFK1 279 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 OR8G5Q8NG78 346 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 OR2AJ1Q8NGZ0 328 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 RP9Q8TA86 221 aaKnown RBP6.52□□□□□ -1.37
VPS50-203ENST00000436177 WFDC12Q8WWY7 111 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 SLC7A6Q92536 515 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 NEIL1Q96FI4 390 aaPredicted RBP6.52□□□□□ -1.37
VPS50-203ENST00000436177 MEGF10Q96KG7 1140 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 HOPXQ9BPY8 73 aaPredicted RBP6.52□□□□□ -1.37
VPS50-203ENST00000436177 CDADC1Q9BWV3 514 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 MMADHCQ9H3L0 296 aaPredicted RBP6.52□□□□□ -1.37
VPS50-203ENST00000436177 POFUT1Q9H488 388 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 GCM1Q9NP62 436 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 ARMCX1Q9P291 453 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 CLN8Q9UBY8 286 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 COA3Q9Y2R0 106 aaPredicted RBP6.52□□□□□ -1.37
VPS50-203ENST00000436177 SNX13Q9Y5W8 968 aa6.52□□□□□ -1.37
VPS50-203ENST00000436177 IGHV3OR16-10A0A075B7F0 116 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 IGHV3-64DA0A0J9YX35 117 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 A0A1W2PRQ8 180 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 UNC119BA6NIH7 251 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 F5H0A9 414 aaPredicted RBP6.51□□□□□ -1.37
VPS50-203ENST00000436177 TRAPPC2LH3BP13 241 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 FFAR1O14842 300 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 RER1O15258 196 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 TMPRSS2O15393 492 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 ZNF205O95201 554 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 GPANK1O95872 356 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 CYB5R3P00387 301 aaPredicted RBP6.51□□□□□ -1.37
VPS50-203ENST00000436177 HLA-DQA2P01906 255 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 SCG5P05408 212 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 RNASE1P07998 156 aaKnown RBP6.51□□□□□ -1.37
VPS50-203ENST00000436177 COX4I1P13073 169 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 FPR3P25089 353 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 SLC6A6P31641 620 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 NUDT2P50583 147 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 SMIM11AP58511 58 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 SEC61A1P61619 476 aaKnown RBP6.51□□□□□ -1.37
VPS50-203ENST00000436177 ECH1Q13011 328 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 DGCR6Q14129 220 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 HLXQ14774 488 aaPredicted RBP6.51□□□□□ -1.37
VPS50-203ENST00000436177 KCNJ8Q15842 424 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 PRR31Q5SQ13 230 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 GPR157Q5UAW9 335 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 TBPL2Q6SJ96 375 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 SMARCD3Q6STE5 483 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 FBXW12Q6X9E4 464 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 DPY19L2P2Q6ZN68 376 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 Q6ZR03 302 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 CBLL1Q75N03 491 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 MRPL21Q7Z2W9 205 aaKnown RBP6.51□□□□□ -1.37
VPS50-203ENST00000436177 FAM122BQ7Z309 247 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 MOGAT3Q86VF5 341 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 KLBQ86Z14 1044 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 SLC7A13Q8TCU3 470 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 SPRYD4Q8WW59 207 aaPredicted RBP6.51□□□□□ -1.37
VPS50-203ENST00000436177 RAB40AQ8WXH6 277 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 TECTBQ96PL2 329 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 PITX2Q99697 317 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 COQ7Q99807 217 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 NUAK2Q9H093 628 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 NSRP1Q9H0G5 558 aaKnown RBP6.51□□□□□ -1.37
VPS50-203ENST00000436177 WDR76Q9H967 626 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 UNKLQ9H9P5 680 aaKnown RBP6.51□□□□□ -1.37
VPS50-203ENST00000436177 EFCAB1Q9HAE3 211 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 TMEM100Q9NV29 134 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 CMTM6Q9NX76 183 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 VSX1Q9NZR4 365 aaPredicted RBP6.51□□□□□ -1.37
VPS50-203ENST00000436177 SAMD4AQ9UPU9 718 aaKnown RBP6.51□□□□□ -1.37
VPS50-203ENST00000436177 POLR3KQ9Y2Y1 108 aaPredicted RBP6.51□□□□□ -1.37
VPS50-203ENST00000436177 IER3IP1Q9Y5U9 82 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 PKD1L1Q8TDX9 2849 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 NOTCH1P46531 2555 aa6.51□□□□□ -1.37
VPS50-203ENST00000436177 IGHV2-70DA0A0C4DH43 119 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 F5H5K5 113 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 F5H5P2 479 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 CLDN34H7C241 214 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 PHYHO14832 338 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 ENSAO43768 121 aaKnown RBP6.5□□□□□ -1.37
VPS50-203ENST00000436177 PPP1R3DO95685 299 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 LCATP04180 440 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 DBHP09172 617 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 WNT2P09544 360 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 PPIAL4GP0DN37 164 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms