RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 LOC110117498-PIK3R3F6TDL0 507 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 GABRPO00591 440 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 SRSF10O75494 262 aaKnown RBP9.86□□□□□ -0.83
LINC00539-203ENST00000434601 CNOT4O95628 575 aaKnown RBP9.86□□□□□ -0.83
LINC00539-203ENST00000434601 SERPINA3P01011 423 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 CRHP06850 196 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 TMIGD3P0DMS9 266 aaPredicted RBP9.86□□□□□ -0.83
LINC00539-203ENST00000434601 HSD11B1P28845 292 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 PCSK6P29122 969 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 DCTDP32321 178 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 TGFBR1P36897 503 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 SERPINB10P48595 397 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 FOXG1P55316 489 aaPredicted RBP9.86□□□□□ -0.83
LINC00539-203ENST00000434601 PSMA6P60900 246 aaKnown RBP9.86□□□□□ -0.83
LINC00539-203ENST00000434601 PCBD1P61457 104 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 GRB2P62993 217 aaKnown RBP9.86□□□□□ -0.83
LINC00539-203ENST00000434601 MFGE8Q08431 387 aaPredicted RBP9.86□□□□□ -0.83
LINC00539-203ENST00000434601 RAB35Q15286 201 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 TAF13Q15543 124 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 WDR38Q5JTN6 314 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 ELFN2Q5R3F8 820 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 C9orf135Q5VTT2 229 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 VWA1Q6PCB0 445 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 USP43Q70EL4 1123 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 SLC16A14Q7RTX9 510 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 SYT9Q86SS6 491 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 DOLPP1Q86YN1 238 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.86□□□□□ -0.83
LINC00539-203ENST00000434601 MS4A15Q8N5U1 240 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 ATF6BQ99941 703 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 SH3GL3Q99963 347 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 PDCD1LG2Q9BQ51 273 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 WACQ9BTA9 647 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 COMMD4Q9H0A8 199 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 DCSTAMPQ9H295 470 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 KCNN2Q9H2S1 579 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 RNF167Q9H6Y7 350 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 NIPAL2Q9H841 368 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 MOB1AQ9H8S9 216 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 TXNL4BQ9NX01 149 aaKnown RBP9.86□□□□□ -0.83
LINC00539-203ENST00000434601 FRRS1LQ9P0K9 344 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 ZNF281Q9Y2X9 895 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 MTORP42345 2549 aa9.86□□□□□ -0.83
LINC00539-203ENST00000434601 OR4C45A6NMZ5 311 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 C19orf84I3L1E1 186 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 DOK2O60496 412 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 TNFSF13O75888 250 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 ZFPL1O95159 310 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 IL18BPO95998 194 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 PNPP00491 289 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 ITGA5P08648 1049 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 CD8BP10966 210 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 ZNF32P17041 273 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 FGF9P31371 208 aaPredicted RBP9.85□□□□□ -0.83
LINC00539-203ENST00000434601 TIMP3P35625 211 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 UGT2B10P36537 528 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 KIR3DL2P43630 455 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 CCR9P51686 369 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 TLE4Q04727 773 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 FOXF2Q12947 444 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 SLC36A2Q495M3 483 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 CCDC92Q53HC0 331 aaPredicted RBP9.85□□□□□ -0.83
LINC00539-203ENST00000434601 YIF1BQ5BJH7 314 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 C22orf42Q6IC83 251 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 TMEM211Q6ICI0 200 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 SPNS3Q6ZMD2 512 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 TMEM91Q6ZNR0 172 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 CATSPERDQ86XM0 798 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 SKA3Q8IX90 412 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 PRSS35Q8N3Z0 413 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 RPRMLQ8N4K4 120 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 OR1K1Q8NGR3 316 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 OR13C5Q8NGS8 318 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 OR5AK2Q8NH90 309 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 ASB5Q8WWX0 329 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 KCTD7Q96MP8 289 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 DMRTA2Q96SC8 542 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 DCLRE1CQ96SD1 692 aaKnown RBP9.85□□□□□ -0.83
LINC00539-203ENST00000434601 HDHD5Q9BXW7 423 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 HDHD2Q9H0R4 259 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 FAM206AQ9NX38 181 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 PLEK2Q9NYT0 353 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 GTF2A1LQ9UNN4 478 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 PROCRQ9UNN8 238 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 GSTK1Q9Y2Q3 226 aa9.85□□□□□ -0.83
LINC00539-203ENST00000434601 A0A096LPE4 126 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 TMEM269A0A1B0GVZ9 245 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 A0A1W2PPZ6 126 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 SGCEO43556 437 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 SC5DO75845 299 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 TOXO94900 526 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 IL2RAP01589 272 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 GLI4P10075 376 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 ZNF182P17025 639 aaPredicted RBP9.84□□□□□ -0.83
LINC00539-203ENST00000434601 COX5AP20674 150 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 CX3CR1P49238 355 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 MMP16P51512 607 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 BCL2L15Q5TBC7 163 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 ANKRD16Q6P6B7 361 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 C3P1Q6ZMU1 363 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms