RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 NAGAP17050 411 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 CD34P28906 385 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 ZNF260Q3ZCT1 412 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 RNASE10Q5GAN6 216 aaKnown RBP10.51□□□□□ -0.73
CD44-209ENST00000433892 LIN54Q6MZP7 749 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 RTN4RL2Q86UN3 420 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 SLC51BQ86UW2 128 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 PDZD9Q8IXQ8 264 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 SPERTQ8NA61 448 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 RELL2Q8NC24 303 aaPredicted RBP10.51□□□□□ -0.73
CD44-209ENST00000433892 OR10H5Q8NGA6 315 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 OR5M9Q8NGP3 310 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 OR5M8Q8NGP6 311 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 NUDCD2Q8WVJ2 157 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 PTX4Q96A99 478 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 FOXRED1Q96CU9 486 aaPredicted RBP10.51□□□□□ -0.73
CD44-209ENST00000433892 DDIT4LQ96D03 193 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 PPA2Q9H2U2 334 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 RAB22AQ9UL26 194 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 OR14I1A6ND48 311 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 LIPT2A6NK58 231 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 VSTM2BA6NLU5 285 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 A8MXK9 166 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 DISC1C4P0D8 188 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 EFNA2O43921 213 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 HEXBP07686 556 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 RAB6AP20340 208 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 IGFBP4P22692 258 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 KLHL24Q6TFL4 600 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 ANKRD37Q7Z713 158 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 NFAM1Q8NET5 270 aaPredicted RBP10.51□□□□□ -0.73
CD44-209ENST00000433892 OR10S1Q8NGN2 331 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 OR13C9Q8NGT0 318 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 OR6S1Q8NH40 331 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 ASB13Q8WXK3 278 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 MRGPRFQ96AM1 343 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 ZBTB8AQ96BR9 441 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 PDCD10Q9BUL8 212 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 PBOV1Q9GZY1 135 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 TMEM185BQ9H7F4 350 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 MYOZ1Q9NP98 299 aaPredicted RBP10.51□□□□□ -0.73
CD44-209ENST00000433892 SERINC1Q9NRX5 453 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 KLRF1Q9NZS2 232 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 SEMA5BQ9P283 1151 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 CYB5R1Q9UHQ9 305 aa10.51□□□□□ -0.73
CD44-209ENST00000433892 TRBV11-1A0A0K0K1C0 115 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 A0A1B0GTI1 187 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 CPED1A4D0V7 1026 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 TSPAN4O14817 238 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 VSIG8P0DPA2 414 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 FOSL2P15408 326 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 GNB3P16520 340 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 PRKACBP22694 351 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 BTN1A1Q13410 526 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 MEF2DQ14814 521 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 TAF13Q15543 124 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 RAB12Q6IQ22 244 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 TMEM81Q6P7N7 255 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 TMPRSS9Q7Z410 1059 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 RNF144BQ7Z419 303 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 STPG2Q8N412 459 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 OR1M1Q8NGA1 313 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 EDAQ92838 391 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 SPACA5Q96QH8 159 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 MS4A7Q9GZW8 240 aaPredicted RBP10.5□□□□□ -0.73
CD44-209ENST00000433892 CST11Q9H112 138 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 SEC61A2Q9H9S3 476 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 B3GAT1Q9P2W7 334 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 ZNF107Q9UII5 783 aaPredicted RBP10.5□□□□□ -0.73
CD44-209ENST00000433892 PLEKHA6Q9Y2H5 1048 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 MED12Q93074 2177 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 TMEM200CA6NKL6 621 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 ZNF208O43345 1280 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 TIAF1O95411 115 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 CD8AP01732 235 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 FGF2P09038 288 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 GIMD1P0DJR0 217 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 BCKDHBP21953 392 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 HSD11B1P28845 292 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 HRH1P35367 487 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 CLDN6P56747 220 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 QRFPP83859 136 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 TAGLNQ01995 201 aaKnown RBP10.5□□□□□ -0.73
CD44-209ENST00000433892 BAMBIQ13145 260 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 MYBPHQ13203 477 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 PPP1R1AQ13522 171 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 ATXN7L3Q14CW9 347 aaPredicted RBP10.5□□□□□ -0.73
CD44-209ENST00000433892 INPP5JQ15735 1006 aaPredicted RBP10.5□□□□□ -0.73
CD44-209ENST00000433892 BEX5Q5H9J7 111 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 FAM74A1Q5RGS3 127 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 CFAP77Q6ZQR2 320 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 SLC22A24Q8N4F4 322 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 BVESQ8NE79 360 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 OR51E1Q8TCB6 317 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 PRRT1Q99946 306 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 TGIF2Q9GZN2 237 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 WDR13Q9H1Z4 485 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 CHRDQ9H2X0 955 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 GPR160Q9UJ42 338 aa10.5□□□□□ -0.73
CD44-209ENST00000433892 B3GALT5Q9Y2C3 310 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms