RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 TBCCD1Q9NVR7 557 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 SLCO1C1Q9NYB5 712 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 MYEF2Q9P2K5 600 aaKnown RBP13.33□□□□□ -0.28
TREX1-201ENST00000433541 STARD10Q9Y365 291 aa13.33□□□□□ -0.28
TREX1-201ENST00000433541 CHD3Q12873 2000 aaKnown RBP13.32□□□□□ -0.28
TREX1-201ENST00000433541 CSMD1Q96PZ7 3565 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 CCDC182A6NF36 153 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 TBX1O43435 398 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 IGHV4-39P01824 125 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 ACSM4P0C7M7 580 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 ZNF250P15622 560 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 MPV17P39210 176 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 EVX1P49640 407 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 MSMPQ1L6U9 139 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 ZCCHC24Q8N2G6 241 aaKnown RBP13.32□□□□□ -0.28
TREX1-201ENST00000433541 OR51G2Q8NGK0 314 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 OR10S1Q8NGN2 331 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 OTOSQ8NHW6 89 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 ST7LQ8TDW4 575 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 MARS2Q96GW9 593 aaKnown RBP13.32□□□□□ -0.28
TREX1-201ENST00000433541 YIPF3Q9GZM5 350 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 MS4A5Q9H3V2 200 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 BRD7Q9NPI1 651 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 PNRC2Q9NPJ4 139 aaKnown RBP13.32□□□□□ -0.28
TREX1-201ENST00000433541 IKZF2Q9UKS7 526 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 TMEM14AQ9Y6G1 99 aa13.32□□□□□ -0.28
TREX1-201ENST00000433541 LOC100130705A0A1B0GUX0 176 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 SNTNA6NMZ2 147 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 APOC1P02654 83 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 ANXA2P07355 339 aaKnown RBP13.31□□□□□ -0.28
TREX1-201ENST00000433541 SLC2A1P11166 492 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 NAT2P11245 290 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 CX3CR1P49238 355 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 HCCSP53701 268 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 PCK2Q16822 640 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 AADACL4Q5VUY2 407 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 KCTD18Q6PI47 426 aaPredicted RBP13.31□□□□□ -0.28
TREX1-201ENST00000433541 DRAM2Q6UX65 266 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 SLC35F2Q8IXU6 374 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 PACRGLQ8N7B6 248 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 TRUB1Q8WWH5 349 aaKnown RBP13.31□□□□□ -0.28
TREX1-201ENST00000433541 Q96MF0 132 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 ZNF582Q96NG8 517 aaPredicted RBP13.31□□□□□ -0.28
TREX1-201ENST00000433541 RDH12Q96NR8 316 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 SORCS2Q96PQ0 1159 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 TBX5Q99593 518 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 DOK1Q99704 481 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 KCNJ15Q99712 375 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 APOL4Q9BPW4 351 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 CXXC4Q9H2H0 198 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 DDX28Q9NUL7 540 aaKnown RBP13.31□□□□□ -0.28
TREX1-201ENST00000433541 FAM118AQ9NWS6 357 aa13.31□□□□□ -0.28
TREX1-201ENST00000433541 WARS2Q9UGM6 360 aaKnown RBP13.31□□□□□ -0.28
TREX1-201ENST00000433541 TMEM129A0AVI4 362 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 ZNF670-ZNF695F2Z2N8 137 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 H3BSA7 217 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 J3QW42 95 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 ICMTO60725 284 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 LY6HO94772 140 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 APOL3O95236 402 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 PAX1P15863 534 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 TUBG1P23258 451 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 HTR1FP30939 366 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 EFNA4P52798 201 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 IL5RAQ01344 420 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 SLC34A1Q06495 639 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 POU4F2Q12837 409 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 HLXQ14774 488 aaPredicted RBP13.3□□□□□ -0.28
TREX1-201ENST00000433541 CLEC12BQ2HXU8 276 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 GFOD2Q3B7J2 385 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 ZMAT1Q5H9K5 638 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 MBNL2Q5VZF2 373 aaKnown RBP13.3□□□□□ -0.28
TREX1-201ENST00000433541 CLEC2AQ6UVW9 174 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 LRRN1Q6UXK5 716 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 MRPL21Q7Z2W9 205 aaKnown RBP13.3□□□□□ -0.28
TREX1-201ENST00000433541 NAA40Q86UY6 237 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 WFDC11Q8NEX6 87 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 UBE2FQ969M7 185 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 CMBLQ96DG6 245 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 AMELYQ99218 206 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 POFUT1Q9H488 388 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 TUBG2Q9NRH3 451 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 CLN6Q9NWW5 311 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.3□□□□□ -0.28
TREX1-201ENST00000433541 OTOGQ6ZRI0 2925 aa13.3□□□□□ -0.28
TREX1-201ENST00000433541 IGLV3-9A0A075B6K5 115 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 PSMD9O00233 223 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 MPZL2O60487 215 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 IGHV3-13P01766 116 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 ZNF81P51508 661 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 CXCR4P61073 352 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 EFNB1P98172 346 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 GGTLC2Q14390 218 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 MEDAGQ5VYS4 303 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 OR5AS1Q8N127 324 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 DHRSXQ8N5I4 330 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 BHLHE23Q8NDY6 225 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 OR10H4Q8NGA5 316 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 RNF133Q8WVZ7 376 aa13.29□□□□□ -0.28
TREX1-201ENST00000433541 ASB17Q8WXJ9 295 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms