RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TXNL4BQ9NX01 149 aaKnown RBP15.94■□□□□ 0.14
HMGN1-206ENST00000431390 ZNF224Q9NZL3 707 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 TINAGQ9UJW2 476 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 GSTK1Q9Y2Q3 226 aa15.94■□□□□ 0.14
HMGN1-206ENST00000431390 TMEM269A0A1B0GVZ9 245 aa15.93■□□□□ 0.14
HMGN1-206ENST00000431390 GABRPO00591 440 aa15.93■□□□□ 0.14
HMGN1-206ENST00000431390 SYNGR3O43761 229 aa15.93■□□□□ 0.14
HMGN1-206ENST00000431390 SC5DO75845 299 aa15.93■□□□□ 0.14
HMGN1-206ENST00000431390 COX5AP20674 150 aa15.93■□□□□ 0.14
HMGN1-206ENST00000431390 MFGE8Q08431 387 aaPredicted RBP15.93■□□□□ 0.14
HMGN1-206ENST00000431390 SPCS2Q15005 226 aa15.93■□□□□ 0.14
HMGN1-206ENST00000431390 TMEM91Q6ZNR0 172 aa15.93■□□□□ 0.14
HMGN1-206ENST00000431390 USP43Q70EL4 1123 aa15.93■□□□□ 0.14
HMGN1-206ENST00000431390 KBTBD8Q8NFY9 601 aa15.93■□□□□ 0.14
HMGN1-206ENST00000431390 ABHD4Q8TB40 342 aa15.93■□□□□ 0.14
HMGN1-206ENST00000431390 PRR7Q8TB68 274 aa15.93■□□□□ 0.14
HMGN1-206ENST00000431390 BCL2L2Q92843 193 aaPredicted RBP15.93■□□□□ 0.14
HMGN1-206ENST00000431390 PDCD1LG2Q9BQ51 273 aa15.93■□□□□ 0.14
HMGN1-206ENST00000431390 HDHD5Q9BXW7 423 aa15.93■□□□□ 0.14
HMGN1-206ENST00000431390 FAM206AQ9NX38 181 aa15.93■□□□□ 0.14
HMGN1-206ENST00000431390 PTTG2Q9NZH5 202 aa15.93■□□□□ 0.14
HMGN1-206ENST00000431390 ATPIF1Q9UII2 106 aa15.93■□□□□ 0.14
HMGN1-206ENST00000431390 ITPR2Q14571 2701 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 A0A096LPE4 126 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 A0A1W2PPW3 197 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 A0A1W2PPZ6 126 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 DOK2O60496 412 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 APOC1P02654 83 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 OTX1P32242 354 aaPredicted RBP15.92■□□□□ 0.14
HMGN1-206ENST00000431390 KIR3DL2P43630 455 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 RPS11P62280 158 aaKnown RBP eCLIP15.92■□□□□ 0.14
HMGN1-206ENST00000431390 PSG4Q00888 419 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 BEND4Q6ZU67 534 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 CCDC36Q8IYA8 594 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 GABRG1Q8N1C3 465 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 C1orf162Q8NEQ5 155 aaPredicted RBP15.92■□□□□ 0.14
HMGN1-206ENST00000431390 IL17RDQ8NFM7 739 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 FGFBP3Q8TAT2 258 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 NDNFQ8TB73 568 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 NANOS1Q8WY41 292 aaKnown RBP15.92■□□□□ 0.14
HMGN1-206ENST00000431390 G6PC2Q9NQR9 355 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 OR52A1Q9UKL2 312 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 PRRC2CQ9Y520 2896 aaKnown RBP15.92■□□□□ 0.14
HMGN1-206ENST00000431390 ARPC4-TTLL3A0A0A6YYG9 625 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 OR6C6A6NF89 314 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 ACOD1A6NK06 481 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 UBL3O95164 117 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 CLDN1O95832 211 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 HOXB1P14653 301 aaPredicted RBP15.92■□□□□ 0.14
HMGN1-206ENST00000431390 OPRM1P35372 400 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 ARR3P36575 388 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 CASP6P55212 293 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 TUBA1BP68363 451 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 C22orf42Q6IC83 251 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 PAMR1Q6UXH9 720 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 TUBA1AQ71U36 451 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 ZNF433Q8N7K0 673 aaPredicted RBP15.92■□□□□ 0.14
HMGN1-206ENST00000431390 ZNF676Q8N7Q3 588 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 ZNF610Q8N9Z0 462 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 OR1F12Q8NHA8 337 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 SPTSSAQ969W0 71 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 KCTD7Q96MP8 289 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 DCLRE1CQ96SD1 692 aaKnown RBP15.92■□□□□ 0.14
HMGN1-206ENST00000431390 WNT5BQ9H1J7 359 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 RNF167Q9H6Y7 350 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 RNF121Q9H920 327 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 GALNT8Q9NY28 637 aa15.92■□□□□ 0.14
HMGN1-206ENST00000431390 E9PLN8 166 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 GATBO75879 557 aaKnown RBP15.91■□□□□ 0.14
HMGN1-206ENST00000431390 PATE4P0C8F1 98 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 CRYGSP22914 178 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 PCSK6P29122 969 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 TGFBR1P36897 503 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 CX3CR1P49238 355 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 PMPCAQ10713 525 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 P2RY6Q15077 328 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 TBRG1Q3YBR2 411 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 ACSM3Q53FZ2 586 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 TMEM211Q6ICI0 200 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 ZNF774Q6NX45 483 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 TMEM53Q6P2H8 277 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 ZNF283Q8N7M2 679 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 PHYHIPQ92561 330 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 VKORC1Q9BQB6 163 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 OPN3Q9H1Y3 402 aaPredicted RBP15.91■□□□□ 0.14
HMGN1-206ENST00000431390 DCSTAMPQ9H295 470 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 PIGMQ9H3S5 423 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 ZNF629Q9UEG4 869 aaPredicted RBP15.91■□□□□ 0.14
HMGN1-206ENST00000431390 NUFIP1Q9UHK0 495 aaKnown RBP15.91■□□□□ 0.14
HMGN1-206ENST00000431390 ERRFI1Q9UJM3 462 aaPredicted RBP15.91■□□□□ 0.14
HMGN1-206ENST00000431390 GTF2A1LQ9UNN4 478 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 SLC22A13Q9Y226 551 aa15.91■□□□□ 0.14
HMGN1-206ENST00000431390 ISG15P05161 165 aa15.9■□□□□ 0.14
HMGN1-206ENST00000431390 UBCP0CG48 685 aaKnown RBP15.9■□□□□ 0.14
HMGN1-206ENST00000431390 COX5BP10606 129 aa15.9■□□□□ 0.14
HMGN1-206ENST00000431390 PRKXP51817 358 aa15.9■□□□□ 0.14
HMGN1-206ENST00000431390 GABRA6Q16445 453 aa15.9■□□□□ 0.14
HMGN1-206ENST00000431390 KRTAP27-1Q3LI81 207 aa15.9■□□□□ 0.14
HMGN1-206ENST00000431390 PABPC1L2AQ5JQF8 200 aa15.9■□□□□ 0.14
HMGN1-206ENST00000431390 BCL2L15Q5TBC7 163 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms