RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 HLA-DPB1P04440 258 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 FABP3P05413 133 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 RAC2P15153 192 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 CFPP27918 469 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 SLC6A6P31641 620 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 LIPAP38571 399 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 GUCA1AP43080 201 aaPredicted RBP9.88□□□□□ -0.83
HDAC4-202ENST00000430200 SLC6A9P48067 706 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 CENPAP49450 140 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 RPS6KA3P51812 740 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 SNAI3Q3KNW1 292 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 ZMAT1Q5H9K5 638 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 UNQ6126/PRO20091Q6UXV3 157 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 CYP2R1Q6VVX0 501 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 PEG10Q86TG7 708 aaKnown RBP9.88□□□□□ -0.83
HDAC4-202ENST00000430200 ZDHHC21Q8IVQ6 265 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 C1orf174Q8IYL3 243 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 DEFB107AQ8IZN7 70 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 BCL6BQ8N143 479 aaPredicted RBP9.88□□□□□ -0.83
HDAC4-202ENST00000430200 C19orf18Q8NEA5 215 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 NSMCE2Q96MF7 247 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 DIRC2Q96SL1 478 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 SLC30A2Q9BRI3 323 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 IFT27Q9BW83 186 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 C7orf69Q9H7B7 122 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 CYB5R1Q9UHQ9 305 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 PPP1R3CQ9UQK1 317 aa9.88□□□□□ -0.83
HDAC4-202ENST00000430200 TVP23AA6NH52 213 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 IQCF6A8MYZ5 107 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 J3QLI3 93 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 FCN3O75636 299 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 ZNF12P17014 697 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 NOS3P29474 1203 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 MAGEA2P43356 314 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 GNGT1P63211 74 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.87□□□□□ -0.83
HDAC4-202ENST00000430200 TRAP1Q12931 704 aaKnown RBP9.87□□□□□ -0.83
HDAC4-202ENST00000430200 MAB21L1Q13394 359 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 GK2Q14410 553 aaPredicted RBP9.87□□□□□ -0.83
HDAC4-202ENST00000430200 TMEM155Q4W5P6 130 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 SAMD4BQ5PRF9 694 aaKnown RBP9.87□□□□□ -0.83
HDAC4-202ENST00000430200 PRAMEF6Q5VXH4 476 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 ARL9Q6T311 187 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 PIGWQ7Z7B1 504 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 MOGAT3Q86VF5 341 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 JAZF1Q86VZ6 243 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 LRRC28Q86X40 367 aaPredicted RBP9.87□□□□□ -0.83
HDAC4-202ENST00000430200 OR8G5Q8NG78 346 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 OR52E2Q8NGJ4 325 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 OR51L1Q8NGJ5 315 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 OR9Q1Q8NGQ5 310 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 OR4Q3Q8NH05 313 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 OR2AE1Q8NHA4 323 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 APOBEC3DQ96AK3 386 aaPredicted RBP9.87□□□□□ -0.83
HDAC4-202ENST00000430200 DUX5Q96PT3 197 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 NDEL1Q9GZM8 345 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 IL1RAPQ9NPH3 570 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 ZNF69Q9UC07 566 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 IL19Q9UHD0 177 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 TAGLN3Q9UI15 199 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 PCDHB10Q9UN67 800 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 POLR3KQ9Y2Y1 108 aaPredicted RBP9.87□□□□□ -0.83
HDAC4-202ENST00000430200 CDH10Q9Y6N8 788 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 COMMD3-BMI1R4GMX3 469 aa9.87□□□□□ -0.83
HDAC4-202ENST00000430200 IGHV3OR16-10A0A075B7F0 116 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 A0A0A6YYJ9 748 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 J3QW42 95 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 SOX14O95416 240 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 GYPBP06028 91 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 IGHV4-38-2P0DP08 117 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 CLUP10909 449 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 CRABP1P29762 137 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 RGS6P49758 472 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 RAD23AP54725 363 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 ACTG1P63261 375 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 SLC3A1Q07837 685 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 TSPAN31Q12999 210 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 KRT72Q14CN4 511 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 MPPED2Q15777 294 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 LYPD2Q6UXB3 125 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 USP43Q70EL4 1123 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 GJC3Q8NFK1 279 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 ZNF418Q8TF45 676 aaPredicted RBP9.86□□□□□ -0.83
HDAC4-202ENST00000430200 ZFAND2BQ8WV99 257 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 PTP4A1Q93096 173 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 ATF6BQ99941 703 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 HCAR1Q9BXC0 346 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 PPIAL4AQ9Y536 164 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 INSIG2Q9Y5U4 225 aa9.86□□□□□ -0.83
HDAC4-202ENST00000430200 PPIAL4EA0A075B759 164 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 PPIAL4CA0A0B4J2A2 164 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 MDFIC2A0A1B0GVS7 189 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 TMEM89A2RUT3 159 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 DNAJC9-AS1A6NH13 148 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 PPIAL4DF5H284 164 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 F5H5K5 113 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 FOXH1O75593 365 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 RENP00797 406 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 WNT2P09544 360 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 PPIAL4FP0DN26 164 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms