RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ALOX5APP20292 161 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 GPR3P46089 330 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 S100A12P80511 92 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 MRPS10P82664 201 aaKnown RBP7.25□□□□□ -1.25
HPS4-205ENST00000429411 MFGE8Q08431 387 aaPredicted RBP7.25□□□□□ -1.25
HPS4-205ENST00000429411 TUSC1Q2TAM9 212 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 SLC22A6Q4U2R8 563 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 KIAA0895LQ68EN5 471 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 FAM180AQ6UWF9 173 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 ABHD12BQ7Z5M8 362 aaPredicted RBP7.25□□□□□ -1.25
HPS4-205ENST00000429411 GALNT16Q8N428 558 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 OR1J4Q8NGS1 313 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 OR2AJ1Q8NGZ0 328 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 FLVCR1-AS1Q8TAF5 88 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 C4orf45Q96LM5 186 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 ST6GALNAC5Q9BVH7 336 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 NUDT9Q9BW91 350 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 PRR13Q9NZ81 148 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 PHF3Q92576 2039 aaKnown RBP7.25□□□□□ -1.25
HPS4-205ENST00000429411 TRAV20A0A0B4J274 112 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 PRR33A8MZF0 331 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 PATE3B3GLJ2 98 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 DISC1C4P0D8 188 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 XRCC3O43542 346 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 NSA2O95478 260 aaKnown RBP7.25□□□□□ -1.25
HPS4-205ENST00000429411 TGM6O95932 706 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 KNG1P01042 644 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 SNRNP70P08621 437 aaKnown RBP7.25□□□□□ -1.25
HPS4-205ENST00000429411 CAPZA1P52907 286 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 TAS2R19P59542 299 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 PRTGQ2VWP7 1150 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 LINC01590Q5TEZ4 76 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 C1orf140Q5VVS0 124 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 ADAMTS18Q8TE60 1221 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 PAQR8Q8TEZ7 354 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 ST8SIA2Q92186 375 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 CTHRC1Q96CG8 243 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 ZDHHC12Q96GR4 267 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 ARRDC1-AS1Q9H2J1 176 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 PPA2Q9H2U2 334 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 METTL7AQ9H8H3 244 aa7.25□□□□□ -1.25
HPS4-205ENST00000429411 ZNF701Q9NV72 531 aaPredicted RBP7.25□□□□□ -1.25
HPS4-205ENST00000429411 TRAV36DV7A0A075B6V5 113 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 ZNF705EA8MWA4 302 aaPredicted RBP7.24□□□□□ -1.25
HPS4-205ENST00000429411 ZNF878C9JN71 531 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 G3V3Y1 287 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 ZNF432O94892 652 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 OR4E1P0C645 316 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 GLI4P10075 376 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 IL11P20809 199 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 H2BFSP57053 126 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 RPL27P61353 136 aaKnown RBP7.24□□□□□ -1.25
HPS4-205ENST00000429411 PMPCAQ10713 525 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 BAMBIQ13145 260 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 SLC17A1Q14916 467 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 ZNF141Q15928 474 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 NKAPLQ5M9Q1 402 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 TMEM65Q6PI78 240 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 ATG4DQ86TL0 474 aaPredicted RBP7.24□□□□□ -1.25
HPS4-205ENST00000429411 ZNF283Q8N7M2 679 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 OTOSQ8NHW6 89 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 ZNF75AQ96N20 296 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 TSNAXQ99598 290 aaKnown RBP7.24□□□□□ -1.25
HPS4-205ENST00000429411 GABRG3Q99928 467 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 VRK1Q99986 396 aaPredicted RBP7.24□□□□□ -1.25
HPS4-205ENST00000429411 JAM3Q9BX67 310 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 RTN4RQ9BZR6 473 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 APMAPQ9HDC9 416 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 ACKR4Q9NPB9 350 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 SUSD2Q9UGT4 822 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 HIF3AQ9Y2N7 669 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 LRP12Q9Y561 859 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 ASPMQ8IZT6 3477 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 ATRXP46100 2492 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 NOTCH2Q04721 2471 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 A0A0B4J2A0 478 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 TMEM272A0A1B0GTI8 110 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 PRSS37A4D1T9 235 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 BLACEA4D250 179 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 A6NLC8 198 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 H7C417 338 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 FADS1O60427 444 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 CIDEAO60543 219 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 UPK3AO75631 287 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 FARS2O95363 451 aaKnown RBP7.24□□□□□ -1.25
HPS4-205ENST00000429411 RRASP10301 218 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 GNB3P16520 340 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 ITGA3P26006 1051 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 BIDP55957 195 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 PRSS12P56730 875 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 PRAMEF20Q5VT98 475 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 ZNF626Q68DY1 528 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 LCN10Q6JVE6 187 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 TMEM88Q6PEY1 159 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 SEZ6L2Q6UXD5 910 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 ZNF679Q8IYX0 411 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 SLC43A2Q8N370 569 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 PRSS35Q8N3Z0 413 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 GPBAR1Q8TDU6 330 aa7.24□□□□□ -1.25
HPS4-205ENST00000429411 DCUN1D4Q92564 292 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms