RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 RPTNQ6XPR3 784 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 ZNF679Q8IYX0 411 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 OR9K2Q8NGE7 335 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 OR13C3Q8NGS6 347 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 SNHG12Q9BXW3 62 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 CLEC1BQ9P126 229 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 CACFD1Q9UGQ2 172 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 A0A087WUU8 490 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 A0A1W2PPC1 479 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 ANTXRLA6NF34 631 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 GCGP01275 180 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 C1QCP02747 245 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 MC3RP41968 323 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 RPL19P84098 196 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 TMEM196Q5HYL7 178 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 YOD1Q5VVQ6 348 aaPredicted RBP13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 ZNF584Q8IVC4 421 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 NUDT10Q8NFP7 164 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 SLC2A12Q8TD20 617 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 ROBO4Q8WZ75 1007 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 EDAQ92838 391 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 EGLN1Q9GZT9 426 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 GLRX2Q9NS18 164 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 FBXO4Q9UKT5 387 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 COLQQ9Y215 455 aaPredicted RBP13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 ZNF736B4DX44 427 aaPredicted RBP13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 CD37P11049 281 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 CXCL12P48061 93 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 CDC34P49427 236 aaPredicted RBP13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 CLDN2P57739 230 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 EIF2B1Q14232 305 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 GKN2Q86XP6 184 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 ACOT4Q8N9L9 421 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 OR13C9Q8NGT0 318 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 ARV1Q9H2C2 271 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 IL21RQ9HBE5 538 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 ZNF337Q9Y3M9 751 aa13.06□□□□□ -0.32
SYNGAP1-203ENST00000428982 SURF4O15260 269 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 LINC00271P0C7V0 271 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 EPHA1P21709 976 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 VASPP50552 380 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 TDGF1P3P51864 188 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 ERVFC1-1P60608 527 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 LTBQ06643 244 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 COMMD1Q8N668 190 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 TSACCQ96A04 125 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 TP53RKQ96S44 253 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 P2RX6O15547 441 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 LAMTOR5O43504 91 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 RPS15AP62244 130 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 PAX5Q02548 391 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 OVCH1Q7RTY7 1134 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 FAM129CQ86XR2 697 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 MITD1Q8WV92 249 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 ZNF385AQ96PM9 386 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 SLC35B3Q9H1N7 401 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 AMDHD2Q9Y303 409 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 CHTOPQ9Y3Y2 248 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 GEMIN2O14893 280 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 GUSBP08236 651 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 F3P13726 295 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 TBPP20226 339 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 ARRB1P49407 418 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 ARHGAP11BQ3KRB8 267 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 DCAF10Q5QP82 559 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 PNLDC1Q8NA58 520 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 CHST4Q8NCG5 386 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 FAM210BQ96KR6 192 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 ZNF2Q9BSG1 426 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 OR52D1Q9H346 318 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 CAPN10Q9HC96 672 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 ADAP2Q9NPF8 381 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 GRHPRQ9UBQ7 328 aa13.05□□□□□ -0.32
SYNGAP1-203ENST00000428982 MASP2O00187 686 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 NDUFS8O00217 210 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 ZNF354AO60765 605 aaPredicted RBP13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 PTNP21246 168 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 ELOCQ15369 112 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 AMZ1Q400G9 498 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 DRAM2Q6UX65 266 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 HMGN2P46Q86SG4 172 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 WDR13Q9H1Z4 485 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 RNF24Q9Y225 148 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 ZNF443Q9Y2A4 671 aaPredicted RBP13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 M0QYG6 137 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 TP53I11O14683 189 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 FFAR1O14842 300 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 CD3DP04234 171 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 GAAP10253 952 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 MIDNQ504T8 468 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 C10orf91Q5T1B1 145 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 GFI1BQ5VTD9 330 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 NIPAL3Q6P499 406 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 FAM199XQ6PEV8 388 aaPredicted RBP13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 FAM160A2Q8N612 972 aaPredicted RBP13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 LMX1AQ8TE12 382 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 RLN3Q8WXF3 142 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 PLEKHA1Q9HB21 404 aa13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 GPR55Q9Y2T6 319 aaPredicted RBP13.04□□□□□ -0.32
SYNGAP1-203ENST00000428982 PCYT1BQ9Y5K3 369 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms