RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 SDR9C7Q8NEX9 313 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 SLC26A10Q8NG04 563 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 OR13G1Q8NGZ3 307 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 DVL3Q92997 716 aaPredicted RBP14.35□□□□□ -0.11
TRIM39-209ENST00000428728 POP5Q969H6 163 aaKnown RBP14.35□□□□□ -0.11
TRIM39-209ENST00000428728 PYURFQ96I23 114 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 ZNF582Q96NG8 517 aaPredicted RBP14.35□□□□□ -0.11
TRIM39-209ENST00000428728 MRI1Q9BV20 369 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 IFT27Q9BW83 186 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 OR5V1Q9UGF6 321 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 B9D1Q9UPM9 204 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 AUP1Q9Y679 476 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 NBEAL1Q6ZS30 2694 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 A8MXK9 166 aa14.34□□□□□ -0.11
TRIM39-209ENST00000428728 F5H5P2 479 aa14.34□□□□□ -0.11
TRIM39-209ENST00000428728 MLNRO43193 412 aa14.34□□□□□ -0.11
TRIM39-209ENST00000428728 RPS2P15880 293 aaKnown RBP14.34□□□□□ -0.11
TRIM39-209ENST00000428728 NOS3P29474 1203 aa14.34□□□□□ -0.11
TRIM39-209ENST00000428728 SRP9P49458 86 aaKnown RBP14.34□□□□□ -0.11
TRIM39-209ENST00000428728 SMIM11AP58511 58 aa14.34□□□□□ -0.11
TRIM39-209ENST00000428728 RFX4Q33E94 735 aa14.34□□□□□ -0.11
TRIM39-209ENST00000428728 SLC27A4Q6P1M0 643 aa14.34□□□□□ -0.11
TRIM39-209ENST00000428728 MOGAT3Q86VF5 341 aa14.34□□□□□ -0.11
TRIM39-209ENST00000428728 DUX5Q96PT3 197 aa14.34□□□□□ -0.11
TRIM39-209ENST00000428728 PITX2Q99697 317 aa14.34□□□□□ -0.11
TRIM39-209ENST00000428728 GORASP2Q9H8Y8 452 aa14.34□□□□□ -0.11
TRIM39-209ENST00000428728 DDX28Q9NUL7 540 aaKnown RBP14.34□□□□□ -0.11
TRIM39-209ENST00000428728 ZNF69Q9UC07 566 aa14.34□□□□□ -0.11
TRIM39-209ENST00000428728 MAGEL2Q9UJ55 1249 aa14.34□□□□□ -0.11
TRIM39-209ENST00000428728 NUP50Q9UKX7 468 aa14.34□□□□□ -0.11
TRIM39-209ENST00000428728 POLR3KQ9Y2Y1 108 aaPredicted RBP14.34□□□□□ -0.11
TRIM39-209ENST00000428728 INSIG2Q9Y5U4 225 aa14.34□□□□□ -0.11
TRIM39-209ENST00000428728 TENM1Q9UKZ4 2725 aa14.34□□□□□ -0.11
TRIM39-209ENST00000428728 IQCF6A8MYZ5 107 aa14.33□□□□□ -0.12
TRIM39-209ENST00000428728 F5H5K5 113 aa14.33□□□□□ -0.12
TRIM39-209ENST00000428728 ARPC2O15144 300 aa14.33□□□□□ -0.12
TRIM39-209ENST00000428728 HLA-DQA2P01906 255 aa14.33□□□□□ -0.12
TRIM39-209ENST00000428728 SELEP16581 610 aa14.33□□□□□ -0.12
TRIM39-209ENST00000428728 FPR3P25089 353 aa14.33□□□□□ -0.12
TRIM39-209ENST00000428728 RRM2P31350 389 aa14.33□□□□□ -0.12
TRIM39-209ENST00000428728 KLF17Q5JT82 389 aaPredicted RBP14.33□□□□□ -0.12
TRIM39-209ENST00000428728 SLC18B1Q6NT16 456 aa14.33□□□□□ -0.12
TRIM39-209ENST00000428728 RBMS3Q6XE24 437 aaKnown RBP14.33□□□□□ -0.12
TRIM39-209ENST00000428728 BCL6BQ8N143 479 aaPredicted RBP14.33□□□□□ -0.12
TRIM39-209ENST00000428728 MCUR1Q96AQ8 359 aa14.33□□□□□ -0.12
TRIM39-209ENST00000428728 NSMCE2Q96MF7 247 aa14.33□□□□□ -0.12
TRIM39-209ENST00000428728 ATF6BQ99941 703 aa14.33□□□□□ -0.12
TRIM39-209ENST00000428728 SLC30A2Q9BRI3 323 aa14.33□□□□□ -0.12
TRIM39-209ENST00000428728 SSBP3Q9BWW4 388 aaPredicted RBP14.33□□□□□ -0.12
TRIM39-209ENST00000428728 HCAR1Q9BXC0 346 aa14.33□□□□□ -0.12
TRIM39-209ENST00000428728 NSRP1Q9H0G5 558 aaKnown RBP14.33□□□□□ -0.12
TRIM39-209ENST00000428728 NTN4Q9HB63 628 aa14.33□□□□□ -0.12
TRIM39-209ENST00000428728 LRCH1Q9Y2L9 728 aa14.33□□□□□ -0.12
TRIM39-209ENST00000428728 IGHV3OR16-10A0A075B7F0 116 aa14.32□□□□□ -0.12
TRIM39-209ENST00000428728 IFNL4K9M1U5 179 aa14.32□□□□□ -0.12
TRIM39-209ENST00000428728 ARPC3O15145 178 aa14.32□□□□□ -0.12
TRIM39-209ENST00000428728 HLA-DPB1P04440 258 aa14.32□□□□□ -0.12
TRIM39-209ENST00000428728 FABP3P05413 133 aa14.32□□□□□ -0.12
TRIM39-209ENST00000428728 ACSM4P0C7M7 580 aa14.32□□□□□ -0.12
TRIM39-209ENST00000428728 HSD17B1P14061 328 aa14.32□□□□□ -0.12
TRIM39-209ENST00000428728 RSPO1Q2MKA7 263 aaPredicted RBP14.32□□□□□ -0.12
TRIM39-209ENST00000428728 SLC36A3Q495N2 470 aa14.32□□□□□ -0.12
TRIM39-209ENST00000428728 AWAT1Q58HT5 328 aa14.32□□□□□ -0.12
TRIM39-209ENST00000428728 FAM201AQ5SY85 155 aa14.32□□□□□ -0.12
TRIM39-209ENST00000428728 SLC35F1Q5T1Q4 408 aa14.32□□□□□ -0.12
TRIM39-209ENST00000428728 ZNF620Q6ZNG0 422 aa14.32□□□□□ -0.12
TRIM39-209ENST00000428728 OR2AJ1Q8NGZ0 328 aa14.32□□□□□ -0.12
TRIM39-209ENST00000428728 ZMYND19Q96E35 227 aaPredicted RBP14.32□□□□□ -0.12
TRIM39-209ENST00000428728 CDADC1Q9BWV3 514 aa14.32□□□□□ -0.12
TRIM39-209ENST00000428728 C1QTNF5Q9BXJ0 243 aa14.32□□□□□ -0.12
TRIM39-209ENST00000428728 TMCC3Q9ULS5 477 aa14.32□□□□□ -0.12
TRIM39-209ENST00000428728 OR6C68A6NDL8 312 aa14.31□□□□□ -0.12
TRIM39-209ENST00000428728 DNAJC9-AS1A6NH13 148 aa14.31□□□□□ -0.12
TRIM39-209ENST00000428728 SNX3O60493 162 aa14.31□□□□□ -0.12
TRIM39-209ENST00000428728 LCATP04180 440 aa14.31□□□□□ -0.12
TRIM39-209ENST00000428728 GSSP48637 474 aa14.31□□□□□ -0.12
TRIM39-209ENST00000428728 GNB2P62879 340 aa14.31□□□□□ -0.12
TRIM39-209ENST00000428728 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRIM39-209ENST00000428728 TRAP1Q12931 704 aaKnown RBP14.31□□□□□ -0.12
TRIM39-209ENST00000428728 SAMD4BQ5PRF9 694 aaKnown RBP14.31□□□□□ -0.12
TRIM39-209ENST00000428728 CLEC12AQ5QGZ9 265 aa14.31□□□□□ -0.12
TRIM39-209ENST00000428728 COLCA1Q6ZS62 124 aa14.31□□□□□ -0.12
TRIM39-209ENST00000428728 KLBQ86Z14 1044 aa14.31□□□□□ -0.12
TRIM39-209ENST00000428728 PGAM4Q8N0Y7 254 aa14.31□□□□□ -0.12
TRIM39-209ENST00000428728 OR52E2Q8NGJ4 325 aa14.31□□□□□ -0.12
TRIM39-209ENST00000428728 TMEM246Q9BRR3 403 aa14.31□□□□□ -0.12
TRIM39-209ENST00000428728 TMEM100Q9NV29 134 aa14.31□□□□□ -0.12
TRIM39-209ENST00000428728 LRRC30A6NM36 301 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 WNT2P09544 360 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 PYCR1P32322 319 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 GGT2P36268 569 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 IFNGR2P38484 337 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 RPS27P42677 84 aaKnown RBP14.3□□□□□ -0.12
TRIM39-209ENST00000428728 MALLQ13021 153 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 GK2Q14410 553 aaPredicted RBP14.3□□□□□ -0.12
TRIM39-209ENST00000428728 KRTAP27-1Q3LI81 207 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 PGBD2Q6P3X8 592 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 DOK3Q7L591 496 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 CPLX4Q7Z7G2 160 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 NAA40Q86UY6 237 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms