RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 HOGA1Q86XE5 327 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 OR51F2Q8NH61 342 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 TSEN15Q8WW01 171 aaKnown RBP14.45□□□□□ -0.1
C9orf3-206ENST00000428313 KCNK6Q9Y257 313 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-206ENST00000428313 ZNF780BQ9Y6R6 833 aa14.45□□□□□ -0.1
C9orf3-206ENST00000428313 NME2P1O60361 137 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 LDB3O75112 727 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 FBXO45P0C2W1 286 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 SEC11BP0C7V7 166 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 METTL15P1P0C7V9 234 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 GZMBP10144 247 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 HIST1H1TP22492 207 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-206ENST00000428313 THPOP40225 353 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 DMWDQ09019 674 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 RPUSD3Q6P087 351 aaKnown RBP14.44□□□□□ -0.1
C9orf3-206ENST00000428313 GRASPQ7Z6J2 395 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-206ENST00000428313 CDC20BQ86Y33 519 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 EXD3Q8N9H8 876 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 SNHG12Q9BXW3 62 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 SLC2A4RGQ9NR83 387 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 OR14J1Q9UGF5 321 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 CLEC4EQ9ULY5 219 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 MEMO1Q9Y316 297 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 STRAPQ9Y3F4 350 aaKnown RBP14.44□□□□□ -0.1
C9orf3-206ENST00000428313 EML5Q05BV3 1969 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 M0R143 59 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 TRGC2P03986 189 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 NGFRP08138 427 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 TRGC1P0CF51 173 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 SLC25A1P53007 311 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 COTL1Q14019 142 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 TRAPPC6BQ86SZ2 158 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 FJX1Q86VR8 437 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 SUMF2Q8NBJ7 301 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 KREMEN2Q8NCW0 462 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 ZPLD1Q8TCW7 415 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 GRHL3Q8TE85 626 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 RCC1LQ96I51 464 aaKnown RBP14.44□□□□□ -0.1
C9orf3-206ENST00000428313 LINC00615Q96LM1 132 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-206ENST00000428313 C4orf45Q96LM5 186 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 DCBLD2Q96PD2 775 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 NELFAQ9H3P2 528 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 FBXL17Q9UF56 701 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 TCFL5Q9UL49 500 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 ABT1Q9ULW3 272 aaKnown RBP14.44□□□□□ -0.1
C9orf3-206ENST00000428313 GTF2A1LQ9UNN4 478 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 PUS1Q9Y606 427 aaKnown RBP eCLIP14.44□□□□□ -0.1
C9orf3-206ENST00000428313 HS3ST3B1Q9Y662 390 aa14.44□□□□□ -0.1
C9orf3-206ENST00000428313 A0A1B0GTH9 108 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 EDN3P14138 238 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 GABRR1P24046 479 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 SLC35A1P78382 337 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 EGR3Q06889 387 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 ZNF616Q08AN1 781 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 LEG1Q6P5S2 330 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 ZNF101Q8IZC7 436 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 OR5AR1Q8NGP9 310 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 PTPN18Q99952 460 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 SPOCK3Q9BQ16 436 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 PITPNC1Q9UKF7 332 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 A0A087WZY1 265 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 A0A1B0GWA3 101 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 LEFTY1O75610 366 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 IFNA6P05013 189 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 QDPRP09417 244 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 OR13C7P0DN81 318 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 CKBP12277 381 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 RPL12P30050 165 aaKnown RBP14.43□□□□□ -0.1
C9orf3-206ENST00000428313 RPL4P36578 427 aaKnown RBP14.43□□□□□ -0.1
C9orf3-206ENST00000428313 CAMLGP49069 296 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 TDGF1P3P51864 188 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 ZNHIT3Q15649 155 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-206ENST00000428313 ZIC1Q15915 447 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 ZNF260Q3ZCT1 412 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 HIKESHIQ53FT3 197 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 DCAF10Q5QP82 559 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 BSCL2Q96G97 398 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-206ENST00000428313 NUDT9Q9BW91 350 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 PRDM7Q9NQW5 492 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 IKZF2Q9UKS7 526 aa14.43□□□□□ -0.1
C9orf3-206ENST00000428313 HEATR5BQ9P2D3 2071 aa14.42□□□□□ -0.1
C9orf3-206ENST00000428313 CEACAM18A8MTB9 384 aa14.42□□□□□ -0.1
C9orf3-206ENST00000428313 RAMP1O60894 148 aa14.42□□□□□ -0.1
C9orf3-206ENST00000428313 MSX1P28360 303 aa14.42□□□□□ -0.1
C9orf3-206ENST00000428313 HRH1P35367 487 aa14.42□□□□□ -0.1
C9orf3-206ENST00000428313 KIR3DL2P43630 455 aa14.42□□□□□ -0.1
C9orf3-206ENST00000428313 CSNK1G2P78368 415 aa14.42□□□□□ -0.1
C9orf3-206ENST00000428313 ODF4Q2M2E3 257 aa14.42□□□□□ -0.1
C9orf3-206ENST00000428313 EXOSC6Q5RKV6 272 aaKnown RBP14.42□□□□□ -0.1
C9orf3-206ENST00000428313 FDX2Q6P4F2 183 aa14.42□□□□□ -0.1
C9orf3-206ENST00000428313 MARCH1Q8TCQ1 289 aa14.42□□□□□ -0.1
C9orf3-206ENST00000428313 OR10C1Q96KK4 312 aa14.42□□□□□ -0.1
C9orf3-206ENST00000428313 FLRT3Q9NZU0 649 aa14.42□□□□□ -0.1
C9orf3-206ENST00000428313 MYADML2A6NDP7 307 aa14.41□□□□□ -0.1
C9orf3-206ENST00000428313 TLCD2A6NGC4 264 aa14.41□□□□□ -0.1
C9orf3-206ENST00000428313 K7EPK0 472 aa14.41□□□□□ -0.1
C9orf3-206ENST00000428313 PEX12O00623 359 aa14.41□□□□□ -0.1
C9orf3-206ENST00000428313 CYB5BO43169 146 aa14.41□□□□□ -0.1
C9orf3-206ENST00000428313 IL18BPO95998 194 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms