RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 CUBNO60494 3623 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 FBN1P35555 2871 aaKnown RBP10.82□□□□□ -0.68
GPC1-204ENST00000426280 TVP23AA6NH52 213 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 M0R129 80 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 TGFAP01135 160 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 GYPBP06028 91 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 ACHEP22303 614 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 GCH1P30793 250 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 GZMKP49863 264 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 ZNF81P51508 661 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 LMO4P61968 165 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 SRSF2Q01130 221 aaKnown RBP10.82□□□□□ -0.68
GPC1-204ENST00000426280 MVKQ03426 396 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 AQP6Q13520 282 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 KRTAP27-1Q3LI81 207 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 ZIK1Q3SY52 487 aaPredicted RBP10.82□□□□□ -0.68
GPC1-204ENST00000426280 LPCAT4Q643R3 524 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 USP51Q70EK9 711 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 DNAJC9Q8WXX5 260 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 C1orf159Q96HA4 380 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 MAP6Q96JE9 813 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 RBM4BQ9BQ04 359 aaKnown RBP10.82□□□□□ -0.68
GPC1-204ENST00000426280 RBM4Q9BWF3 364 aaKnown RBP10.82□□□□□ -0.68
GPC1-204ENST00000426280 HCAR1Q9BXC0 346 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 RIBC2Q9H4K1 309 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 SLC25A19Q9HC21 320 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 CMC2Q9NRP2 79 aa10.82□□□□□ -0.68
GPC1-204ENST00000426280 SONP18583 2426 aaKnown RBP10.82□□□□□ -0.68
GPC1-204ENST00000426280 RIIAD1A6NNX1 92 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 SURF4O15260 269 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 PPIHO43447 177 aaKnown RBP10.81□□□□□ -0.68
GPC1-204ENST00000426280 ABHD16AO95870 558 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 ALPLP05186 524 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 ERCC1P07992 297 aaPredicted RBP10.81□□□□□ -0.68
GPC1-204ENST00000426280 CRABP1P29762 137 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 CRYBB2P43320 205 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 GPR6P46095 362 aaPredicted RBP10.81□□□□□ -0.68
GPC1-204ENST00000426280 CHN2P52757 468 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 SELENOVP59797 346 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 ESRRGP62508 458 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 SLC18B1Q6NT16 456 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 TMEM154Q6P9G4 183 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 ZNF540Q8NDQ6 660 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 OTULINQ96BN8 352 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 C9orf16Q9BUW7 83 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 WDR76Q9H967 626 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 TBCCD1Q9NVR7 557 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 NKIRAS2Q9NYR9 191 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 TVP23BQ9NYZ1 205 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 USE1Q9NZ43 259 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 PTTG3PQ9NZH4 202 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 NKX1-2Q9UD57 310 aaPredicted RBP10.81□□□□□ -0.68
GPC1-204ENST00000426280 PURGQ9UJV8 347 aaKnown RBP10.81□□□□□ -0.68
GPC1-204ENST00000426280 NDRG4Q9ULP0 352 aaKnown RBP10.81□□□□□ -0.68
GPC1-204ENST00000426280 MALRD1Q5VYJ5 2156 aa10.81□□□□□ -0.68
GPC1-204ENST00000426280 IGHV1-69-2A0A0G2JMI3 117 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 ZAR1LA6NP61 321 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 H0YL77 283 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 IFNGP01579 166 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 ZNF3P17036 446 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 SPI1P17947 270 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 ALDH3A2P51648 485 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 CDH15P55291 814 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 TMEM33P57088 247 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 CDK5R2Q13319 367 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 LRRC36Q1X8D7 754 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 CHRFAM7AQ494W8 412 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 FAM120AOSQ5T036 256 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 SLX4IPQ5VYV7 408 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 FAM166AQ6J272 317 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 DNM1P34Q6PK57 102 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 ZBTB49Q6ZSB9 765 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 OR5AS1Q8N127 324 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 ZNF511Q8NB15 262 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 PTP4A1Q93096 173 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 EME1Q96AY2 570 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 HAVCR1Q96D42 359 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 WACQ9BTA9 647 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 GABARAPL3Q9BY60 117 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 NMNAT2Q9BZQ4 307 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 ELOVL3Q9HB03 270 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 LPAR2Q9HBW0 351 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 CYB5R1Q9UHQ9 305 aa10.8□□□□□ -0.68
GPC1-204ENST00000426280 PRKYO43930 277 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 HMGN1P05114 100 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 KITLGP21583 273 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 PEX2P28328 305 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 SLC25A1P53007 311 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 MRPS11P82912 194 aaKnown RBP10.79□□□□□ -0.68
GPC1-204ENST00000426280 SNAPC1Q16533 368 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 CR1LQ2VPA4 569 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 C12orf73Q69YU5 71 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 OR2T2Q6IF00 324 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 PLBD1Q6P4A8 553 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 BCDIN3DQ7Z5W3 292 aaKnown RBP10.79□□□□□ -0.68
GPC1-204ENST00000426280 CPOQ8IVL8 374 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 GALNT4Q8N4A0 578 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 PROKR2Q8NFJ6 384 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 BBS1Q8NFJ9 593 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 GJC3Q8NFK1 279 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms