RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 CLRN1P58418 232 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 FXYD4P59646 89 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 RPL27P61353 136 aaKnown RBP11.97□□□□□ -0.49
USP42-203ENST00000426246 PPP1R1AQ13522 171 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 HNF4GQ14541 408 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 PHF19Q5T6S3 580 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 C9orf135Q5VTT2 229 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 PAPD4Q6PIY7 484 aaKnown RBP11.97□□□□□ -0.49
USP42-203ENST00000426246 GKN2Q86XP6 184 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 ZNF679Q8IYX0 411 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 LHX6Q9UPM6 363 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 SPTA1P02549 2419 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 NAP1L6A6NFF2 107 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 NXPH3O95157 252 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 GIPP09681 153 aaPredicted RBP11.97□□□□□ -0.49
USP42-203ENST00000426246 SKP2Q13309 424 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 SHBQ15464 509 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 TMPPEQ6ZT21 453 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 OR6N1Q8NGY5 312 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 MAFAQ8NHW3 353 aaPredicted RBP11.97□□□□□ -0.49
USP42-203ENST00000426246 DAZLQ92904 295 aaKnown RBP11.97□□□□□ -0.49
USP42-203ENST00000426246 PIGTQ969N2 578 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 C7orf50Q9BRJ6 194 aaKnown RBP11.97□□□□□ -0.49
USP42-203ENST00000426246 CST11Q9H112 138 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 KIAA2026Q5HYC2 2103 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 LILRA5A6NI73 299 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 PIAS2O75928 621 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 STK17BO94768 372 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 IGHV3-9P01782 118 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 CBR1P16152 277 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 SLC37A1P57057 533 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 MANEAQ5SRI9 462 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 BIVMQ86UB2 503 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 ADAD2Q8NCV1 583 aaKnown RBP11.97□□□□□ -0.49
USP42-203ENST00000426246 TCTN2Q96GX1 697 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 TMPRSS13Q9BYE2 586 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 UPB1Q9UBR1 384 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 FAM96BQ9Y3D0 163 aa11.97□□□□□ -0.49
USP42-203ENST00000426246 GPR31O00270 319 aa11.96□□□□□ -0.49
USP42-203ENST00000426246 ACTBP60709 375 aa11.96□□□□□ -0.49
USP42-203ENST00000426246 ACTG1P63261 375 aa11.96□□□□□ -0.49
USP42-203ENST00000426246 RIN1Q13671 783 aa11.96□□□□□ -0.49
USP42-203ENST00000426246 RBM39Q14498 530 aaKnown RBP11.96□□□□□ -0.49
USP42-203ENST00000426246 TMEM176BQ3YBM2 270 aaPredicted RBP11.96□□□□□ -0.49
USP42-203ENST00000426246 C20orf196Q8IYI0 205 aa11.96□□□□□ -0.49
USP42-203ENST00000426246 SLC25A45Q8N413 288 aa11.96□□□□□ -0.49
USP42-203ENST00000426246 RBM24Q9BX46 236 aaKnown RBP11.96□□□□□ -0.49
USP42-203ENST00000426246 MRPL22Q9NWU5 206 aaKnown RBP11.96□□□□□ -0.49
USP42-203ENST00000426246 HIF3AQ9Y2N7 669 aa11.96□□□□□ -0.49
USP42-203ENST00000426246 FAM74A7A6NL05 159 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 F8W036 122 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 RER1O15258 196 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 NSA2O95478 260 aaKnown RBP11.96□□□□□ -0.5
USP42-203ENST00000426246 HEXBP07686 556 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 ASCL1P50553 236 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 TAS2R19P59542 299 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 BLOC1S1P78537 153 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 AIMP2Q13155 320 aaKnown RBP11.96□□□□□ -0.5
USP42-203ENST00000426246 LPAL2Q16609 132 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 FAM74A3Q4VXF1 159 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 LIN37Q96GY3 246 aaPredicted RBP11.96□□□□□ -0.5
USP42-203ENST00000426246 OR8B4Q96RC9 309 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 IER2Q9BTL4 223 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 CNTD2Q9H8S5 307 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 TRAV36DV7A0A075B6V5 113 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 IGHV3-64DA0A0J9YX35 117 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 WDPCPO95876 746 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 TGM6O95932 706 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 SERPINA5P05154 406 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 AFF3P51826 1226 aaKnown RBP11.96□□□□□ -0.5
USP42-203ENST00000426246 HNRNPKP61978 463 aaKnown RBP eCLIP11.96□□□□□ -0.5
USP42-203ENST00000426246 ZNF141Q15928 474 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 MAML2Q8IZL2 1156 aaPredicted RBP11.96□□□□□ -0.5
USP42-203ENST00000426246 OR1L3Q8NH93 324 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 ELP5Q8TE02 316 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 ASB5Q8WWX0 329 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 ZNF285Q96NJ3 590 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 C20orf24Q9BUV8 137 aa11.96□□□□□ -0.5
USP42-203ENST00000426246 PRMT8Q9NR22 394 aaPredicted RBP11.96□□□□□ -0.5
USP42-203ENST00000426246 TRBV11-1A0A0K0K1C0 115 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 BCAT2O15382 392 aaPredicted RBP11.95□□□□□ -0.5
USP42-203ENST00000426246 KLK2P20151 261 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 SLC35D3Q5M8T2 416 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 NAA40Q86UY6 237 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 CDC20BQ86Y33 519 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 C9orf40Q8IXQ3 194 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 GTPBP8Q8N3Z3 284 aaPredicted RBP11.95□□□□□ -0.5
USP42-203ENST00000426246 SEH1LQ96EE3 360 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 PPP4R1LQ9P1A2 415 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 A0A0A6YYH2 397 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 PLSCR5A0PG75 271 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 LINC00862A6NCI5 91 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 A6NJ64 397 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 NME2P22392 152 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 CD96P40200 585 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 PPICP45877 212 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 DHPSP49366 369 aaPredicted RBP11.95□□□□□ -0.5
USP42-203ENST00000426246 HSD17B7P56937 341 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 SERTAD2Q14140 314 aa11.95□□□□□ -0.5
USP42-203ENST00000426246 ZNF585AQ6P3V2 769 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms