RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 SLC15A1P46059 708 aa21.03■□□□□ 0.96
VEGFA-209ENST00000425836 ISL1P61371 349 aa21.03■□□□□ 0.96
VEGFA-209ENST00000425836 GRB2P62993 217 aaKnown RBP21.03■□□□□ 0.96
VEGFA-209ENST00000425836 SETD9Q8NE22 299 aa21.03■□□□□ 0.96
VEGFA-209ENST00000425836 SLC25A40Q8TBP6 338 aa21.03■□□□□ 0.96
VEGFA-209ENST00000425836 RNFT2Q96EX2 444 aa21.03■□□□□ 0.96
VEGFA-209ENST00000425836 MNTQ99583 582 aa21.03■□□□□ 0.96
VEGFA-209ENST00000425836 C1QTNF5Q9BXJ0 243 aa21.03■□□□□ 0.96
VEGFA-209ENST00000425836 OR2J1Q9GZK6 312 aa21.03■□□□□ 0.96
VEGFA-209ENST00000425836 PLK3Q9H4B4 646 aa21.03■□□□□ 0.96
VEGFA-209ENST00000425836 RTTNQ86VV8 2226 aa21.03■□□□□ 0.96
VEGFA-209ENST00000425836 AKAP6Q13023 2319 aa21.02■□□□□ 0.96
VEGFA-209ENST00000425836 OVOL3O00110 214 aa21.02■□□□□ 0.96
VEGFA-209ENST00000425836 ZNF250P15622 560 aa21.02■□□□□ 0.96
VEGFA-209ENST00000425836 PRKXP51817 358 aa21.02■□□□□ 0.96
VEGFA-209ENST00000425836 C6orf52Q5T4I8 152 aa21.02■□□□□ 0.96
VEGFA-209ENST00000425836 USP51Q70EK9 711 aa21.02■□□□□ 0.96
VEGFA-209ENST00000425836 RFLNBQ8N5W9 214 aa21.02■□□□□ 0.96
VEGFA-209ENST00000425836 MBD6Q96DN6 1003 aa21.02■□□□□ 0.96
VEGFA-209ENST00000425836 SYT3Q9BQG1 590 aa21.02■□□□□ 0.96
VEGFA-209ENST00000425836 POFUT1Q9H488 388 aa21.02■□□□□ 0.96
VEGFA-209ENST00000425836 DUSP13Q9UII6 198 aa21.02■□□□□ 0.96
VEGFA-209ENST00000425836 HSPE1-MOB4S4R3N1 261 aa21.02■□□□□ 0.96
VEGFA-209ENST00000425836 POLQO75417 2590 aa21.02■□□□□ 0.95
VEGFA-209ENST00000425836 PRR32B1ATL7 298 aa21.02■□□□□ 0.95
VEGFA-209ENST00000425836 J3QW42 95 aa21.02■□□□□ 0.95
VEGFA-209ENST00000425836 H2BFMP0C1H6 154 aa21.02■□□□□ 0.95
VEGFA-209ENST00000425836 EVX1P49640 407 aa21.02■□□□□ 0.95
VEGFA-209ENST00000425836 ZNF91Q05481 1191 aa21.02■□□□□ 0.95
VEGFA-209ENST00000425836 DRAM2Q6UX65 266 aa21.02■□□□□ 0.95
VEGFA-209ENST00000425836 LRRN1Q6UXK5 716 aa21.02■□□□□ 0.95
VEGFA-209ENST00000425836 CNIH3Q8TBE1 160 aa21.02■□□□□ 0.95
VEGFA-209ENST00000425836 SYNPRQ8TBG9 265 aa21.02■□□□□ 0.95
VEGFA-209ENST00000425836 ASB17Q8WXJ9 295 aa21.02■□□□□ 0.95
VEGFA-209ENST00000425836 APOBEC3DQ96AK3 386 aaPredicted RBP21.02■□□□□ 0.95
VEGFA-209ENST00000425836 DOK1Q99704 481 aa21.02■□□□□ 0.95
VEGFA-209ENST00000425836 CXorf56Q9H5V9 222 aa21.02■□□□□ 0.95
VEGFA-209ENST00000425836 AMBNQ9NP70 447 aa21.02■□□□□ 0.95
VEGFA-209ENST00000425836 SLCO1C1Q9NYB5 712 aa21.02■□□□□ 0.95
VEGFA-209ENST00000425836 NOTCH2Q04721 2471 aa21.01■□□□□ 0.95
VEGFA-209ENST00000425836 ZNF670-ZNF695F2Z2N8 137 aa21.01■□□□□ 0.95
VEGFA-209ENST00000425836 CLPTM1O96005 669 aa21.01■□□□□ 0.95
VEGFA-209ENST00000425836 LCATP04180 440 aa21.01■□□□□ 0.95
VEGFA-209ENST00000425836 OR2T7P0C7T2 308 aa21.01■□□□□ 0.95
VEGFA-209ENST00000425836 MPV17P39210 176 aa21.01■□□□□ 0.95
VEGFA-209ENST00000425836 CXCR4P61073 352 aa21.01■□□□□ 0.95
VEGFA-209ENST00000425836 DEFB113Q30KQ7 82 aa21.01■□□□□ 0.95
VEGFA-209ENST00000425836 ZNF718Q3SXZ3 478 aa21.01■□□□□ 0.95
VEGFA-209ENST00000425836 KCTD18Q6PI47 426 aaPredicted RBP21.01■□□□□ 0.95
VEGFA-209ENST00000425836 IZUMO2Q6UXV1 221 aa21.01■□□□□ 0.95
VEGFA-209ENST00000425836 C8orf59Q8N0T1 100 aaPredicted RBP21.01■□□□□ 0.95
VEGFA-209ENST00000425836 OR2T27Q8NH04 317 aa21.01■□□□□ 0.95
VEGFA-209ENST00000425836 KLF14Q8TD94 323 aaPredicted RBP21.01■□□□□ 0.95
VEGFA-209ENST00000425836 COG8Q96MW5 612 aa21.01■□□□□ 0.95
VEGFA-209ENST00000425836 TTTY10Q9BZA0 68 aa21.01■□□□□ 0.95
VEGFA-209ENST00000425836 MYEF2Q9P2K5 600 aaKnown RBP21.01■□□□□ 0.95
VEGFA-209ENST00000425836 PLCE1Q9P212 2302 aa21■□□□□ 0.95
VEGFA-209ENST00000425836 PDZD2O15018 2839 aa21■□□□□ 0.95
VEGFA-209ENST00000425836 PSMD9O00233 223 aa21■□□□□ 0.95
VEGFA-209ENST00000425836 DBTP11182 482 aaKnown RBP21■□□□□ 0.95
VEGFA-209ENST00000425836 TUBG1P23258 451 aa21■□□□□ 0.95
VEGFA-209ENST00000425836 HSD11B1P28845 292 aa21■□□□□ 0.95
VEGFA-209ENST00000425836 SLC6A9P48067 706 aa21■□□□□ 0.95
VEGFA-209ENST00000425836 ROM1Q03395 351 aa21■□□□□ 0.95
VEGFA-209ENST00000425836 SMN1Q16637 294 aaKnown RBP21■□□□□ 0.95
VEGFA-209ENST00000425836 MBNL2Q5VZF2 373 aaKnown RBP21■□□□□ 0.95
VEGFA-209ENST00000425836 ZNF322Q6U7Q0 402 aaPredicted RBP21■□□□□ 0.95
VEGFA-209ENST00000425836 KRT77Q7Z794 578 aa21■□□□□ 0.95
VEGFA-209ENST00000425836 HIST2H2ABQ8IUE6 130 aaPredicted RBP21■□□□□ 0.95
VEGFA-209ENST00000425836 ZNF283Q8N7M2 679 aa21■□□□□ 0.95
VEGFA-209ENST00000425836 OR10H4Q8NGA5 316 aa21■□□□□ 0.95
VEGFA-209ENST00000425836 OR8B4Q96RC9 309 aa21■□□□□ 0.95
VEGFA-209ENST00000425836 TBX5Q99593 518 aa21■□□□□ 0.95
VEGFA-209ENST00000425836 CACNG6Q9BXT2 260 aa21■□□□□ 0.95
VEGFA-209ENST00000425836 TUBG2Q9NRH3 451 aa21■□□□□ 0.95
VEGFA-209ENST00000425836 BEX4Q9NWD9 120 aaPredicted RBP21■□□□□ 0.95
VEGFA-209ENST00000425836 IGLV3-9A0A075B6K5 115 aa20.99■□□□□ 0.95
VEGFA-209ENST00000425836 J3QRE1 110 aa20.99■□□□□ 0.95
VEGFA-209ENST00000425836 PHYHO14832 338 aa20.99■□□□□ 0.95
VEGFA-209ENST00000425836 ANOS1P23352 680 aa20.99■□□□□ 0.95
VEGFA-209ENST00000425836 CDKN1AP38936 164 aa20.99■□□□□ 0.95
VEGFA-209ENST00000425836 CX3CR1P49238 355 aa20.99■□□□□ 0.95
VEGFA-209ENST00000425836 SNRPD2P62316 118 aaKnown RBP20.99■□□□□ 0.95
VEGFA-209ENST00000425836 DEGS2Q6QHC5 323 aa20.99■□□□□ 0.95
VEGFA-209ENST00000425836 OR5L1Q8NGL2 311 aa20.99■□□□□ 0.95
VEGFA-209ENST00000425836 LGALS12Q96DT0 336 aa20.99■□□□□ 0.95
VEGFA-209ENST00000425836 ZNF701Q9NV72 531 aaPredicted RBP20.99■□□□□ 0.95
VEGFA-209ENST00000425836 EXOGQ9Y2C4 368 aaKnown RBP20.99■□□□□ 0.95
VEGFA-209ENST00000425836 RPL36Q9Y3U8 105 aaKnown RBP20.99■□□□□ 0.95
VEGFA-209ENST00000425836 LRP12Q9Y561 859 aa20.99■□□□□ 0.95
VEGFA-209ENST00000425836 A0A1W2PQL4 384 aaPredicted RBP20.98■□□□□ 0.95
VEGFA-209ENST00000425836 H3BSA7 217 aa20.98■□□□□ 0.95
VEGFA-209ENST00000425836 SLC2A1P11166 492 aa20.98■□□□□ 0.95
VEGFA-209ENST00000425836 GCH1P30793 250 aa20.98■□□□□ 0.95
VEGFA-209ENST00000425836 VHLP40337 213 aa20.98■□□□□ 0.95
VEGFA-209ENST00000425836 KLF3P57682 345 aaPredicted RBP20.98■□□□□ 0.95
VEGFA-209ENST00000425836 SELENOVP59797 346 aa20.98■□□□□ 0.95
VEGFA-209ENST00000425836 CDK5R2Q13319 367 aa20.98■□□□□ 0.95
VEGFA-209ENST00000425836 TMEM255AQ5JRV8 349 aa20.98■□□□□ 0.95
VEGFA-209ENST00000425836 SSX6Q7RTT6 188 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms