RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 PLEK2Q9NYT0 353 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 CLCF1Q9UBD9 225 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 CLEC4AQ9UMR7 237 aa13.34□□□□□ -0.27
ACTB-204ENST00000425660 A0A1B0GTI1 187 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 H3BSH0 61 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 P2RY10O00398 339 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 KRT33AO76009 404 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 WISP2O76076 250 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 APOA1P02647 267 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 APOC1P02654 83 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 CCL1P22362 96 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 CRYGSP22914 178 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 AGTR1P30556 359 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 ECH1Q13011 328 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 OXA1LQ15070 435 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 RAB35Q15286 201 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 SAMD12Q8N8I0 201 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 OR8B12Q8NGG6 310 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 OR13C3Q8NGS6 347 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 ABCB10Q9NRK6 738 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 GLRX2Q9NS18 164 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 ZNF275Q9NSD4 429 aaPredicted RBP13.33□□□□□ -0.28
ACTB-204ENST00000425660 ZNF319Q9P2F9 582 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 CKLFQ9UBR5 152 aa13.33□□□□□ -0.28
ACTB-204ENST00000425660 PRRC2CQ9Y520 2896 aaKnown RBP13.33□□□□□ -0.28
ACTB-204ENST00000425660 TNRC6AQ8NDV7 1962 aaKnown RBP13.32□□□□□ -0.28
ACTB-204ENST00000425660 ZNF587BE7ETH6 402 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 SGCEO43556 437 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 SYNGR3O43761 229 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 IGLV3-1P01715 115 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 IGHV3-9P01782 118 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 SCAND1P57086 179 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 PCBD1P61457 104 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 KRTAP27-1Q3LI81 207 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 Q6ZNX1 250 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 DCDC5Q6ZRR9 648 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 NUFIP2Q7Z417 695 aaKnown RBP13.32□□□□□ -0.28
ACTB-204ENST00000425660 RBMXL3Q8N7X1 1067 aaKnown RBP13.32□□□□□ -0.28
ACTB-204ENST00000425660 SARAFQ96BY9 339 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 GMPPAQ96IJ6 420 aaPredicted RBP13.32□□□□□ -0.28
ACTB-204ENST00000425660 SLC17A5Q9NRA2 495 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 MALT1Q9UDY8 824 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 TIMM10BQ9Y5J6 103 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 OR14I1A6ND48 311 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 OR6C6A6NF89 314 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 ANXA2P2A6NMY6 339 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 MKRN2OSH3BPM6 223 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 K7ENP7 123 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 SYT7O43581 403 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 SS18L1O75177 396 aaPredicted RBP13.32□□□□□ -0.28
ACTB-204ENST00000425660 FARS2O95363 451 aaKnown RBP13.32□□□□□ -0.28
ACTB-204ENST00000425660 MAS1P04201 325 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 EIF4EP06730 217 aaKnown RBP13.32□□□□□ -0.28
ACTB-204ENST00000425660 ANXA2P07355 339 aaKnown RBP13.32□□□□□ -0.28
ACTB-204ENST00000425660 MMP7P09237 267 aaPredicted RBP13.32□□□□□ -0.28
ACTB-204ENST00000425660 CALCBP10092 127 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 SNRPBP14678 240 aaKnown RBP13.32□□□□□ -0.28
ACTB-204ENST00000425660 ZNF32P17041 273 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 GALK2Q01415 458 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 INO80CQ6PI98 192 aaPredicted RBP13.32□□□□□ -0.28
ACTB-204ENST00000425660 ZNF813Q6ZN06 617 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 SKA3Q8IX90 412 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 ZNF283Q8N7M2 679 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 OR5H6Q8NGV6 325 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 SPTSSAQ969W0 71 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 LIN7BQ9HAP6 207 aa13.32□□□□□ -0.28
ACTB-204ENST00000425660 ANKRD11Q6UB99 2663 aaPredicted RBP13.31□□□□□ -0.28
ACTB-204ENST00000425660 A0A0B4J203 849 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 A0A0U1RQV5 110 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 K7EM74 188 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 M0R135 149 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 DOK2O60496 412 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 SLC2A1P11166 492 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 ANOS1P23352 680 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 GUSBP1Q15486 140 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 BAK1Q16611 211 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 HES5Q5TA89 166 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 Q6ZSR3 168 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 SLC16A14Q7RTX9 510 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 CENPSQ8N2Z9 138 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 MINDY2Q8NBR6 621 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 PLPP7Q8NBV4 271 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 OR51E1Q8TCB6 317 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 ZNF799Q96GE5 643 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 OR2H1Q9GZK4 316 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 EXTL2Q9UBQ6 330 aa13.31□□□□□ -0.28
ACTB-204ENST00000425660 A0A1B0GVI7 797 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 MEGF11A6BM72 1044 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 FAM25AB3EWG3 89 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 FAM25CB3EWG5 89 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 FAM25GB3EWG6 89 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 F5H5K5 113 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 TALDO1P37837 337 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 PSG4Q00888 419 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 P2RY14Q15391 338 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 FAM166AQ6J272 317 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 ZNF529Q6P280 563 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 DRAM2Q6UX65 266 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 ABHD12BQ7Z5M8 362 aaPredicted RBP13.3□□□□□ -0.28
ACTB-204ENST00000425660 LUZP2Q86TE4 346 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms