RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 RAP1BP61224 184 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 RAP1AP62834 184 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 MRPS34P82930 218 aaKnown RBP4.52□□□□□ -1.69
VPS8-205ENST00000424721 ST3GAL3Q11203 375 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 BAMBIQ13145 260 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 MAD2L1BPQ15013 274 aaPredicted RBP4.52□□□□□ -1.69
VPS8-205ENST00000424721 HIST3H3Q16695 136 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 GTDC1Q4AE62 458 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 ARMCX4Q5H9R4 360 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 PABPC1L2AQ5JQF8 200 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 ZNF362Q5T0B9 420 aaPredicted RBP4.52□□□□□ -1.69
VPS8-205ENST00000424721 FAM27BQ5VT28 67 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 METTL21CQ5VZV1 264 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 ERICH5Q6P6B1 374 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 BTNL3Q6UXE8 466 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 LRRN1Q6UXK5 716 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 MYPOPQ86VE0 399 aaPredicted RBP4.52□□□□□ -1.69
VPS8-205ENST00000424721 PTOV1Q86YD1 416 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 CCDC28AQ8IWP9 274 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 MUC20Q8N307 709 aaPredicted RBP4.52□□□□□ -1.69
VPS8-205ENST00000424721 SMYD1Q8NB12 490 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 NPEPL1Q8NDH3 523 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 SEMA6DQ8NFY4 1073 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 IL17DQ8TAD2 202 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 ADAMTS16Q8TE57 1224 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 LZICQ8WZA0 190 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 PTP4A1Q93096 173 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 SGTBQ96EQ0 304 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 PLEKHA8Q96JA3 519 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 C4orf45Q96LM5 186 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 SAMD8Q96LT4 415 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 OR52B2Q96RD2 323 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 NEU1Q99519 415 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 ARHGDIGQ99819 225 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 SIKE1Q9BRV8 207 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 ALG12Q9BV10 488 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 MS4A7Q9GZW8 240 aaPredicted RBP4.52□□□□□ -1.69
VPS8-205ENST00000424721 GHITMQ9H3K2 345 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 TXNIPQ9H3M7 391 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 G6PC2Q9NQR9 355 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 PLEK2Q9NYT0 353 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 UBAP1Q9NZ09 502 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 VAPAQ9P0L0 249 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 NDRG4Q9ULP0 352 aaKnown RBP4.52□□□□□ -1.69
VPS8-205ENST00000424721 SLC7A7Q9UM01 511 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 AP3M1Q9Y2T2 418 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 MED31Q9Y3C7 131 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 WIPI2Q9Y4P8 454 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 NPTNQ9Y639 398 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 AUP1Q9Y679 476 aa4.52□□□□□ -1.69
VPS8-205ENST00000424721 MALRD1Q5VYJ5 2156 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 ANK3Q12955 4377 aaKnown RBP4.51□□□□□ -1.69
VPS8-205ENST00000424721 LOC102723971A0A1B0GUV8 181 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 NPIPB13A6NJU9 1138 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 LRRC30A6NM36 301 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 NPIPB4C9JG80 1138 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 M0QYG6 137 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 XKRYO14609 159 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 FAM20BO75063 409 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 TRMUO75648 421 aaKnown RBP4.51□□□□□ -1.69
VPS8-205ENST00000424721 OR7A10O76100 309 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 OR5F1O95221 314 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 CD55P08174 381 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 CST2P09228 141 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 PPIAL4GP0DN37 164 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 COX5BP10606 129 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 CCL2P13500 99 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 PRTN3P24158 256 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 ZNF133P52736 654 aaPredicted RBP4.51□□□□□ -1.69
VPS8-205ENST00000424721 RPL27P61353 136 aaKnown RBP4.51□□□□□ -1.69
VPS8-205ENST00000424721 PPP1CBP62140 327 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 UBA52P62987 128 aaKnown RBP4.51□□□□□ -1.69
VPS8-205ENST00000424721 LCN2P80188 198 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 TNFAIP6P98066 277 aaPredicted RBP4.51□□□□□ -1.69
VPS8-205ENST00000424721 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.51□□□□□ -1.69
VPS8-205ENST00000424721 CD47Q08722 323 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 KCNJ8Q15842 424 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 DUSP7Q16829 419 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 TMEM155Q4W5P6 130 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 ESCO2Q56NI9 601 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 AWAT1Q58HT5 328 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 TTMPQ5BVD1 217 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 MTX3Q5HYI7 312 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 PAGE3Q5JUK9 113 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 C10orf128Q5T292 105 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 AVPI1Q5T686 147 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 AGBL2Q5U5Z8 902 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 DLEU7Q6UYE1 221 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 WDR88Q6ZMY6 472 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 CCDC80Q76M96 950 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 LRRC28Q86X40 367 aaPredicted RBP4.51□□□□□ -1.69
VPS8-205ENST00000424721 CARM1Q86X55 608 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 ZNF584Q8IVC4 421 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 FUNDC1Q8IVP5 155 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 RNF113BQ8IZP6 322 aaKnown RBP4.51□□□□□ -1.69
VPS8-205ENST00000424721 C1orf87Q8N0U7 546 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 DPP10Q8N608 796 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 OR52E2Q8NGJ4 325 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 OR6T1Q8NGN1 323 aa4.51□□□□□ -1.69
VPS8-205ENST00000424721 OR9I1Q8NGQ6 314 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms