RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 KLF17Q5JT82 389 aaPredicted RBP3.15□□□□□ -1.91
TOP2A-201ENST00000423485 RNF220Q5VTB9 566 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 FBXW12Q6X9E4 464 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 LILRA3Q8N6C8 439 aaPredicted RBP3.15□□□□□ -1.91
TOP2A-201ENST00000423485 CLRN3Q8NCR9 226 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 OR2T12Q8NG77 320 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 ACTL9Q8TC94 416 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 F2RL3Q96RI0 385 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 MRPL57Q9BQC6 102 aaKnown RBP3.15□□□□□ -1.91
TOP2A-201ENST00000423485 MAGT1Q9H0U3 335 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 HRASLSQ9HDD0 168 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 TNFRSF12AQ9NP84 129 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 TRAPPC2LQ9UL33 140 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 KLK4Q9Y5K2 254 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 TMEM14AQ9Y6G1 99 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 U3KQK5 164 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 PLIN3O60664 434 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 SHBGP04278 402 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 THBS1P07996 1170 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 B4GALT1P15291 398 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 SHC1P29353 583 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 ADRA1AP35348 466 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 GLRXP35754 106 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 POU3F1Q03052 451 aaPredicted RBP3.14□□□□□ -1.91
TOP2A-201ENST00000423485 XKR7Q5GH72 579 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 METRNLQ641Q3 311 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 ADGRD1Q6QNK2 874 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 ZNF782Q6ZMW2 699 aaPredicted RBP3.14□□□□□ -1.91
TOP2A-201ENST00000423485 COLCA1Q6ZS62 124 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 TUSC5Q8IXB3 177 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 LSMEM1Q8N8F7 131 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 NUDT10Q8NFP7 164 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 OR13C4Q8NGS5 318 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 OR10D3Q8NH80 312 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 SLC44A1Q8WWI5 657 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 NUDT11Q96G61 164 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 RNF145Q96MT1 663 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 CPXM1Q96SM3 734 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 PRSS27Q9BQR3 290 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 VN1R1Q9GZP7 353 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 WDR55Q9H6Y2 383 aaPredicted RBP3.14□□□□□ -1.91
TOP2A-201ENST00000423485 ZNF665Q9H7R5 613 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 EFCAB1Q9HAE3 211 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 ZNF224Q9NZL3 707 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 RABAC1Q9UI14 185 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 MYO9AB2RTY4 2548 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 TMEM131Q92545 1883 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 DNAJC13O75165 2243 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 CADP27708 2225 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 MYO18BQ8IUG5 2567 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 CLPSL1A2RUU4 121 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 PGPA6NDG6 321 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 SEC14L6B5MCN3 397 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 GSTZ1O43708 216 aaPredicted RBP3.14□□□□□ -1.91
TOP2A-201ENST00000423485 BANF1O75531 89 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 UPK3AO75631 287 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 UROSP10746 265 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 EVI2BP34910 448 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 GDNFP39905 211 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 CATR1Q13166 79 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 LASP1Q14847 261 aaKnown RBP3.14□□□□□ -1.91
TOP2A-201ENST00000423485 NSUN5P2Q63ZY6 315 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 TMEM107Q6UX40 140 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 PRR18Q8N4B5 295 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 OR4K15Q8NH41 348 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 MARCH1Q8TCQ1 289 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 RAB2BQ8WUD1 216 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 FRZBQ92765 325 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 METTL2AQ96IZ6 378 aaKnown RBP3.14□□□□□ -1.91
TOP2A-201ENST00000423485 APOL4Q9BPW4 351 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 INIPQ9NRY2 104 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 PLEKHJ1Q9NW61 149 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 MAGEL2Q9UJ55 1249 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 INTS1Q8N201 2190 aaKnown RBP3.14□□□□□ -1.91
TOP2A-201ENST00000423485 TMED7-TICAM2A0A0A6YYA0 188 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 PRSS51A0A1B0GVH4 220 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 LEUTXA8MZ59 168 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 KDM4EB2RXH2 506 aaPredicted RBP3.14□□□□□ -1.91
TOP2A-201ENST00000423485 TMPRSS2O15393 492 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 NCK1P16333 377 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 DHODHQ02127 395 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 TMEM44Q2T9K0 475 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 C4orf46Q504U0 113 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 ZNF789Q5FWF6 425 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 GJB7Q6PEY0 223 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 TMPRSS11AQ6ZMR5 421 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 SCD5Q86SK9 330 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 WDFY1Q8IWB7 410 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 METTL4Q8N3J2 472 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 TMEM52Q8NDY8 209 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 PLPP5Q8NEB5 264 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 OR52E6Q96RD3 313 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 SPATA25Q9BR10 227 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 DUSP26Q9BV47 211 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 ITPAQ9BY32 194 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 SIRT3Q9NTG7 399 aaPredicted RBP3.14□□□□□ -1.91
TOP2A-201ENST00000423485 NECAP2Q9NVZ3 263 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 CD300AQ9UGN4 299 aa3.14□□□□□ -1.91
TOP2A-201ENST00000423485 CNOT6Q9ULM6 557 aaKnown RBP3.14□□□□□ -1.91
TOP2A-201ENST00000423485 TRAPPC4Q9Y296 219 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms