RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TMED1Q13445 227 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 IL18R1Q13478 541 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 SMN1Q16637 294 aaKnown RBP7.98□□□□□ -1.13
PDGFC-202ENST00000422544 SPATA46Q5T0L3 261 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 ZNF544Q6NX49 715 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 ARL9Q6T311 187 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 PAMR1Q6UXH9 720 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 IZUMO2Q6UXV1 221 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 C20orf204Q6ZNR8 217 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 RFPL4BQ6ZWI9 263 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 FBXL14Q8N1E6 418 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 MUC15Q8N387 334 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 SETD9Q8NE22 299 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 OR1J1Q8NGS3 322 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 CNIH3Q8TBE1 160 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 RNF133Q8WVZ7 376 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 SPTSSAQ969W0 71 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 DCLRE1CQ96SD1 692 aaKnown RBP7.98□□□□□ -1.13
PDGFC-202ENST00000422544 TBX5Q99593 518 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 KCNJ15Q99712 375 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 CCL19Q99731 98 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 TTTY10Q9BZA0 68 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 BCL2L14Q9BZR8 327 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 ZNF442Q9H7R0 627 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 ELOVL3Q9HB03 270 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 FAIMQ9NVQ4 179 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 ATPIF1Q9UII2 106 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 ST6GALNAC2Q9UJ37 374 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 STARD10Q9Y365 291 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 CMAHPQ9Y471 501 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 PLCE1Q9P212 2302 aa7.98□□□□□ -1.13
PDGFC-202ENST00000422544 A0A1W2PQL4 384 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-202ENST00000422544 TMEM129A0AVI4 362 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 PRR32B1ATL7 298 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 ZNF878C9JN71 531 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 M0R135 149 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 MAGEB4O15481 346 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-202ENST00000422544 ATE1O95260 518 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 RAF1P04049 648 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 LCATP04180 440 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 H2BFMP0C1H6 154 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 OR2T7P0C7T2 308 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 SLC2A1P11166 492 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 DBTP11182 482 aaKnown RBP7.97□□□□□ -1.13
PDGFC-202ENST00000422544 CD53P19397 219 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 VHLP40337 213 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 OPRL1P41146 370 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 SLC15A1P46059 708 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 SLC6A9P48067 706 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 TPTEP56180 551 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 PPP1CBP62140 327 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 RPS23P62266 143 aaKnown RBP7.97□□□□□ -1.13
PDGFC-202ENST00000422544 ZNF91Q05481 1191 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 POU4F2Q12837 409 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 CDK5R2Q13319 367 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 MST1LQ2TV78 715 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 AGAP6Q5VW22 663 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 RGS7BPQ6MZT1 257 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-202ENST00000422544 LRRN1Q6UXK5 716 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 UNQ6126/PRO20091Q6UXV3 157 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 USP51Q70EK9 711 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 LRP11Q86VZ4 500 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-202ENST00000422544 C8orf59Q8N0T1 100 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-202ENST00000422544 RFLNBQ8N5W9 214 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 OR10H4Q8NGA5 316 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 OR2T27Q8NH04 317 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 SLC25A40Q8TBP6 338 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 ASB17Q8WXJ9 295 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 MRPL24Q96A35 216 aaKnown RBP7.97□□□□□ -1.13
PDGFC-202ENST00000422544 LGALS12Q96DT0 336 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 ZNF799Q96GE5 643 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 MNTQ99583 582 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 SYT3Q9BQG1 590 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 TRAF4Q9BUZ4 470 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-202ENST00000422544 MRPL37Q9BZE1 423 aaKnown RBP7.97□□□□□ -1.13
PDGFC-202ENST00000422544 POFUT1Q9H488 388 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 PLK3Q9H4B4 646 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 CBLN4Q9NTU7 201 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 TBCCD1Q9NVR7 557 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 SLCO1C1Q9NYB5 712 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 DUSP13Q9UII6 198 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 EDARQ9UNE0 448 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 N6AMT1Q9Y5N5 214 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 TMEM14AQ9Y6G1 99 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 HSPE1-MOB4S4R3N1 261 aa7.97□□□□□ -1.13
PDGFC-202ENST00000422544 JMJD1CQ15652 2540 aa7.96□□□□□ -1.13
PDGFC-202ENST00000422544 COL6A5A8TX70 2615 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 C5orf63A6NC05 138 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 B9A039 149 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 ZNF670-ZNF695F2Z2N8 137 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 J3QRE1 110 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 ICMTO60725 284 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 CLPTM1O96005 669 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 ANOS1P23352 680 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 DNASE1P24855 282 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 HSD11B1P28845 292 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 OTX1P32242 354 aaPredicted RBP7.96□□□□□ -1.14
PDGFC-202ENST00000422544 MPV17P39210 176 aa7.96□□□□□ -1.14
PDGFC-202ENST00000422544 CX3CR1P49238 355 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms