RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 MFGE8Q08431 387 aaPredicted RBP14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 GSG1Q2KHT4 349 aa14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 ODF4Q2M2E3 257 aa14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 WDR38Q5JTN6 314 aa14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 PAMR1Q6UXH9 720 aa14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 BHLHA15Q7RTS1 189 aaPredicted RBP14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 MRGPRGQ86SM5 289 aa14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 CATSPERDQ86XM0 798 aa14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 ZNF799Q96GE5 643 aa14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 PGLYRP3Q96LB9 341 aa14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 DOK1Q99704 481 aa14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 PDCD1LG2Q9BQ51 273 aa14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 HDHD5Q9BXW7 423 aa14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 WNT5BQ9H1J7 359 aa14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 FRRS1LQ9P0K9 344 aa14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 ATPIF1Q9UII2 106 aa14.97□□□□□ -0.01
CCDC28B-202ENST00000421922 TRDV1A0A1B0GX56 115 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 GABRPO00591 440 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 SYNGR3O43761 229 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 GPX5O75715 221 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 MMP7P09237 267 aaPredicted RBP14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 UBCP0CG48 685 aaKnown RBP14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 GALP22466 123 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 CRYBB2P43320 205 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 MMP16P51512 607 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 ZNF121P58317 390 aaPredicted RBP14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 RAB1AP62820 205 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 TUBA1BP68363 451 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 FABP5Q01469 135 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 GABRA6Q16445 453 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 CTF1Q16619 201 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 YIF1BQ5BJH7 314 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 ZNF704Q6ZNC4 412 aaPredicted RBP14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 USP43Q70EL4 1123 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 TUBA1AQ71U36 451 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 COMMD2Q86X83 199 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 PRSS35Q8N3Z0 413 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 C17orf78Q8N4C9 275 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 TSEN15Q8WW01 171 aaKnown RBP14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 THRSPQ92748 146 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 PGAM5Q96HS1 289 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 FAM206AQ9NX38 181 aa14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 SF3B6Q9Y3B4 125 aaKnown RBP14.96□□□□□ -0.01
CCDC28B-202ENST00000421922 COL6A6A6NMZ7 2263 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 ACOD1A6NK06 481 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 LRRTM2O43300 516 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 ZFPL1O95159 310 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 MAPK3P27361 379 aaPredicted RBP14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 APLNRP35414 380 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 KIR3DL2P43630 455 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 SERPINB10P48595 397 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 NCS1P62166 190 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 CNPY1Q3B7I2 92 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 SFRP5Q5T4F7 317 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 TMEM244Q5VVB8 128 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 C22orf42Q6IC83 251 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 DRAM2Q6UX65 266 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 FAM57BQ71RH2 274 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 FGFBP3Q8TAT2 258 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 ABHD4Q8TB40 342 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 RPS4Y2Q8TD47 263 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 KCTD7Q96MP8 289 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 DMRTA2Q96SC8 542 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 CENPOQ9BU64 300 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 PBOV1Q9GZY1 135 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 TXNL4BQ9NX01 149 aaKnown RBP14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 COQ3Q9NZJ6 369 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 SLC22A13Q9Y226 551 aa14.95□□□□□ -0.02
CCDC28B-202ENST00000421922 OR4C45A6NMZ5 311 aa14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 TBX1O43435 398 aa14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 PNPP00491 289 aa14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 COX5BP10606 129 aa14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 SLC2A1P11166 492 aa14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 MYL9P24844 172 aa14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 TSC22D1Q15714 1073 aa14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 ACSM3Q53FZ2 586 aa14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 NCCRP1Q6ZVX7 275 aaPredicted RBP14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 CEACAM19Q7Z692 300 aa14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 MDP1Q86V88 176 aa14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 ZNF843Q8N446 348 aa14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 GPR148Q8TDV2 347 aa14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 SLC24A3Q9HC58 644 aa14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 OBP2BQ9NPH6 170 aa14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 SLC17A5Q9NRA2 495 aa14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 ZNF224Q9NZL3 707 aa14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 NUFIP1Q9UHK0 495 aaKnown RBP14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 AMDHD2Q9Y303 409 aa14.94□□□□□ -0.02
CCDC28B-202ENST00000421922 ARPC4-TTLL3A0A0A6YYG9 625 aa14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 A0A1B0GVI7 797 aa14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 SRSF10O75494 262 aaKnown RBP14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 GATBO75879 557 aaKnown RBP14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 ARL6IP5O75915 188 aa14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 OCM2P0CE71 109 aa14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 ACHEP22303 614 aa14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 CCNOP22674 350 aa14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 APEX1P27695 318 aaKnown RBP14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 FGF9P31371 208 aaPredicted RBP14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 MRPL49Q13405 166 aaKnown RBP14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 GFOD2Q3B7J2 385 aa14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 CD200R1LQ6Q8B3 271 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms