RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 C11orf88Q6PI97 169 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 TMPPEQ6ZT21 453 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 C9orf62Q8N4C0 152 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 TMEM105Q8N8V8 129 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 NOXO1Q8NFA2 376 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 OR4S1Q8NGB4 309 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 OR2Y1Q8NGV0 311 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 RNF133Q8WVZ7 376 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 CMTM3Q96MX0 182 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 GPER1Q99527 375 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 ACTR6Q9GZN1 396 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 CNTD2Q9H8S5 307 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 PRMT8Q9NR22 394 aaPredicted RBP9.72□□□□□ -0.85
DDX56-203ENST00000421223 CYB5R1Q9UHQ9 305 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 PADI1Q9ULC6 663 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 A0A0G2JMM0 328 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 A0A1W2PPB8 328 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 A0A1W2PRS3 328 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 KIR3DP1A8MWS1 328 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 JMJD7P0C870 316 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 ZNF121P58317 390 aaPredicted RBP9.72□□□□□ -0.85
DDX56-203ENST00000421223 PSMA6P60900 246 aaKnown RBP9.72□□□□□ -0.85
DDX56-203ENST00000421223 CD276Q5ZPR3 534 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 FDX2Q6P4F2 183 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 ARL6IP6Q8N6S5 226 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 NAXEQ8NCW5 288 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 OR14L1PQ8NHC6 308 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 OXGR1Q96P68 337 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 FAM117AQ9C073 453 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 SLC26A1Q9H2B4 701 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 EXO5Q9H790 373 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 PLEKHA1Q9HB21 404 aa9.72□□□□□ -0.85
DDX56-203ENST00000421223 H7C417 338 aa9.71□□□□□ -0.85
DDX56-203ENST00000421223 TLX3O43711 291 aaPredicted RBP9.71□□□□□ -0.85
DDX56-203ENST00000421223 PGA4P0DJD7 388 aa9.71□□□□□ -0.85
DDX56-203ENST00000421223 PGA3P0DJD8 388 aa9.71□□□□□ -0.85
DDX56-203ENST00000421223 PTGS2P35354 604 aa9.71□□□□□ -0.85
DDX56-203ENST00000421223 FAUP35544 74 aaKnown RBP9.71□□□□□ -0.85
DDX56-203ENST00000421223 DCAF12Q5T6F0 453 aa9.71□□□□□ -0.85
DDX56-203ENST00000421223 IMMP1LQ96LU5 166 aa9.71□□□□□ -0.85
DDX56-203ENST00000421223 DPCDQ9BVM2 203 aaPredicted RBP9.71□□□□□ -0.85
DDX56-203ENST00000421223 ELL3Q9HB65 397 aaPredicted RBP9.71□□□□□ -0.85
DDX56-203ENST00000421223 GPR84Q9NQS5 396 aa9.71□□□□□ -0.85
DDX56-203ENST00000421223 MTFP1Q9UDX5 166 aa9.71□□□□□ -0.85
DDX56-203ENST00000421223 LOC105371267A0A1B0GV96 52 aa9.71□□□□□ -0.86
DDX56-203ENST00000421223 TSPAN9O75954 239 aa9.71□□□□□ -0.86
DDX56-203ENST00000421223 AMY2AP04746 511 aa9.71□□□□□ -0.86
DDX56-203ENST00000421223 HCKP08631 526 aa9.71□□□□□ -0.86
DDX56-203ENST00000421223 ACHEP22303 614 aa9.71□□□□□ -0.86
DDX56-203ENST00000421223 BDKRB2P30411 391 aa9.71□□□□□ -0.86
DDX56-203ENST00000421223 EIF1P41567 113 aaKnown RBP9.71□□□□□ -0.86
DDX56-203ENST00000421223 CSNK1A1P48729 337 aa9.71□□□□□ -0.86
DDX56-203ENST00000421223 PMPCAQ10713 525 aa9.71□□□□□ -0.86
DDX56-203ENST00000421223 EXT1Q16394 746 aa9.71□□□□□ -0.86
DDX56-203ENST00000421223 NHLRC1Q6VVB1 395 aa9.71□□□□□ -0.86
DDX56-203ENST00000421223 OR1J2Q8NGS2 313 aa9.71□□□□□ -0.86
DDX56-203ENST00000421223 TNFAIP8L1Q8WVP5 186 aa9.71□□□□□ -0.86
DDX56-203ENST00000421223 MICU1Q9BPX6 476 aa9.71□□□□□ -0.86
DDX56-203ENST00000421223 ZNF416Q9BWM5 594 aa9.71□□□□□ -0.86
DDX56-203ENST00000421223 MRPL13Q9BYD1 178 aaKnown RBP9.71□□□□□ -0.86
DDX56-203ENST00000421223 CHST6Q9GZX3 395 aa9.71□□□□□ -0.86
DDX56-203ENST00000421223 WDR54Q9H977 334 aa9.71□□□□□ -0.86
DDX56-203ENST00000421223 ZNF275Q9NSD4 429 aaPredicted RBP9.71□□□□□ -0.86
DDX56-203ENST00000421223 LOXL2Q9Y4K0 774 aa9.71□□□□□ -0.86
DDX56-203ENST00000421223 C5orf63A6NC05 138 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 HSPB2A8KAH6 182 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 NTN3O00634 580 aaPredicted RBP9.7□□□□□ -0.86
DDX56-203ENST00000421223 YKT6O15498 198 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 AQP8O94778 261 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 UBCP0CG48 685 aaKnown RBP9.7□□□□□ -0.86
DDX56-203ENST00000421223 ZP1P60852 638 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 TSPAN5P62079 268 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 SLC35A1P78382 337 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 MRPS10P82664 201 aaKnown RBP9.7□□□□□ -0.86
DDX56-203ENST00000421223 MC2RQ01718 297 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 ZFP36L1Q07352 338 aaKnown RBP9.7□□□□□ -0.86
DDX56-203ENST00000421223 HSPB2Q16082 182 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 AWAT2Q6E213 333 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 STEAP1BQ6NZ63 245 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 PLXDC2Q6UX71 529 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 ZNF767PQ75MW2 155 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 RTN4RL2Q86UN3 420 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 ANGPTL5Q86XS5 388 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 FTMTQ8N4E7 242 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 OR6M1Q8NGM8 313 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 TINAGL1Q9GZM7 467 aaPredicted RBP9.7□□□□□ -0.86
DDX56-203ENST00000421223 BANF2Q9H503 90 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 ZFP64Q9NPA5 681 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 CA10Q9NS85 328 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 ZNF319Q9P2F9 582 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 ATPIF1Q9UII2 106 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 NCOA6Q14686 2063 aaPredicted RBP9.7□□□□□ -0.86
DDX56-203ENST00000421223 OR5H15A6NDH6 313 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 NAP1L6A6NFF2 107 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 C19orf67A6NJJ6 358 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 TNFRSF10AO00220 468 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 CREBL2O60519 120 aaPredicted RBP9.7□□□□□ -0.86
DDX56-203ENST00000421223 RAB3DO95716 219 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 IGHV3-9P01782 118 aa9.7□□□□□ -0.86
DDX56-203ENST00000421223 P04436 131 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms