RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 GPA33Q99795 319 aa17.14■□□□□ 0.33
MCF2L-212ENST00000420013 GCM1Q9NP62 436 aa17.14■□□□□ 0.33
MCF2L-212ENST00000420013 NDE1Q9NXR1 346 aa17.14■□□□□ 0.33
MCF2L-212ENST00000420013 TAGLN3Q9UI15 199 aa17.14■□□□□ 0.33
MCF2L-212ENST00000420013 KCNG2Q9UJ96 466 aa17.14■□□□□ 0.33
MCF2L-212ENST00000420013 AUP1Q9Y679 476 aa17.14■□□□□ 0.33
MCF2L-212ENST00000420013 A0A1B0GWJ7 208 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 CEACAM18A8MTB9 384 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 DCTN6O00399 190 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 DYNC1I1O14576 645 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 DCTN3O75935 186 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 GYS2P54840 703 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 ZNF154Q13106 437 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 RFX4Q33E94 735 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 OR2T2Q6IF00 324 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 C16orf89Q6UX73 402 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 ZBTB46Q86UZ6 589 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 ATG16L2Q8NAA4 619 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 OR10AD1Q8NGE0 317 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 TSSK2Q96PF2 358 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 CDRT15Q96T59 188 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 SLC30A2Q9BRI3 323 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 HCAR1Q9BXC0 346 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 C1QTNF5Q9BXJ0 243 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 DDX28Q9NUL7 540 aaKnown RBP17.13■□□□□ 0.33
MCF2L-212ENST00000420013 NUP50Q9UKX7 468 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 TMCC3Q9ULS5 477 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 B9D1Q9UPM9 204 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 INSIG2Q9Y5U4 225 aa17.13■□□□□ 0.33
MCF2L-212ENST00000420013 OR10H3O60404 316 aa17.12■□□□□ 0.33
MCF2L-212ENST00000420013 FABP3P05413 133 aa17.12■□□□□ 0.33
MCF2L-212ENST00000420013 NOS3P29474 1203 aa17.12■□□□□ 0.33
MCF2L-212ENST00000420013 MSX2P35548 267 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-212ENST00000420013 UBA52P62987 128 aaKnown RBP17.12■□□□□ 0.33
MCF2L-212ENST00000420013 MEP1BQ16820 701 aa17.12■□□□□ 0.33
MCF2L-212ENST00000420013 KRTAP27-1Q3LI81 207 aa17.12■□□□□ 0.33
MCF2L-212ENST00000420013 OTPQ5XKR4 325 aa17.12■□□□□ 0.33
MCF2L-212ENST00000420013 SLC18B1Q6NT16 456 aa17.12■□□□□ 0.33
MCF2L-212ENST00000420013 RPL13AP3Q6NVV1 102 aa17.12■□□□□ 0.33
MCF2L-212ENST00000420013 RBMS3Q6XE24 437 aaKnown RBP17.12■□□□□ 0.33
MCF2L-212ENST00000420013 ZNF620Q6ZNG0 422 aa17.12■□□□□ 0.33
MCF2L-212ENST00000420013 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-212ENST00000420013 ZDHHC22Q8N966 263 aa17.12■□□□□ 0.33
MCF2L-212ENST00000420013 NMNAT3Q96T66 252 aa17.12■□□□□ 0.33
MCF2L-212ENST00000420013 ATF6BQ99941 703 aa17.12■□□□□ 0.33
MCF2L-212ENST00000420013 ESM1Q9NQ30 184 aa17.12■□□□□ 0.33
MCF2L-212ENST00000420013 NOP16Q9Y3C1 178 aaKnown RBP17.12■□□□□ 0.33
MCF2L-212ENST00000420013 LRRC30A6NM36 301 aa17.11■□□□□ 0.33
MCF2L-212ENST00000420013 MLNRO43193 412 aa17.11■□□□□ 0.33
MCF2L-212ENST00000420013 PPIAL4GP0DN37 164 aa17.11■□□□□ 0.33
MCF2L-212ENST00000420013 HIST1H1CP16403 213 aaKnown RBP17.11■□□□□ 0.33
MCF2L-212ENST00000420013 GATA4P43694 442 aa17.11■□□□□ 0.33
MCF2L-212ENST00000420013 GSSP48637 474 aa17.11■□□□□ 0.33
MCF2L-212ENST00000420013 HLXQ14774 488 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-212ENST00000420013 SPATS1Q496A3 300 aa17.11■□□□□ 0.33
MCF2L-212ENST00000420013 DOK3Q7L591 496 aa17.11■□□□□ 0.33
MCF2L-212ENST00000420013 OR6V1Q8N148 313 aa17.11■□□□□ 0.33
MCF2L-212ENST00000420013 CELF2-AS1Q8N7Q2 184 aa17.11■□□□□ 0.33
MCF2L-212ENST00000420013 C3orf56Q8N813 242 aa17.11■□□□□ 0.33
MCF2L-212ENST00000420013 IFT27Q9BW83 186 aa17.11■□□□□ 0.33
MCF2L-212ENST00000420013 SSBP3Q9BWW4 388 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-212ENST00000420013 RPRD1BQ9NQG5 326 aaKnown RBP17.11■□□□□ 0.33
MCF2L-212ENST00000420013 MMP26Q9NRE1 261 aa17.11■□□□□ 0.33
MCF2L-212ENST00000420013 MIOXQ9UGB7 285 aa17.11■□□□□ 0.33
MCF2L-212ENST00000420013 TRAPPC2LH3BP13 241 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 ARPC2O15144 300 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 GPANK1O95872 356 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 ACSM4P0C7M7 580 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 RPS2P15880 293 aaKnown RBP17.1■□□□□ 0.33
MCF2L-212ENST00000420013 MNAT1P51948 309 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 SEC61A1P61619 476 aaKnown RBP17.1■□□□□ 0.33
MCF2L-212ENST00000420013 TSPAN31Q12999 210 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 MALLQ13021 153 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 CORO6Q6QEF8 472 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 CFAP77Q6ZQR2 320 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 DEFB107AQ8IZN7 70 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 OR52L1Q8NGH7 329 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 OR2AJ1Q8NGZ0 328 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 OR4K13Q8NH42 304 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 ERGIC1Q969X5 290 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 PLEKHA8Q96JA3 519 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 PITX2Q99697 317 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 PLA2G12AQ9BZM1 189 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 IL1RAPQ9NPH3 570 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 ARL8BQ9NVJ2 186 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 CYB5R1Q9UHQ9 305 aa17.1■□□□□ 0.33
MCF2L-212ENST00000420013 RRM2P31350 389 aa17.09■□□□□ 0.33
MCF2L-212ENST00000420013 TRAP1Q12931 704 aaKnown RBP17.09■□□□□ 0.33
MCF2L-212ENST00000420013 HNRNPA0Q13151 305 aaKnown RBP17.09■□□□□ 0.33
MCF2L-212ENST00000420013 BTNL3Q6UXE8 466 aa17.09■□□□□ 0.33
MCF2L-212ENST00000420013 NLRC3Q7RTR2 1065 aa17.09■□□□□ 0.33
MCF2L-212ENST00000420013 LINC00471Q8N535 108 aa17.09■□□□□ 0.33
MCF2L-212ENST00000420013 BHLHE23Q8NDY6 225 aa17.09■□□□□ 0.33
MCF2L-212ENST00000420013 SDR9C7Q8NEX9 313 aa17.09■□□□□ 0.33
MCF2L-212ENST00000420013 SGMS2Q8NHU3 365 aa17.09■□□□□ 0.33
MCF2L-212ENST00000420013 GNPDA2Q8TDQ7 276 aa17.09■□□□□ 0.33
MCF2L-212ENST00000420013 NEIL1Q96FI4 390 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-212ENST00000420013 CDADC1Q9BWV3 514 aa17.09■□□□□ 0.33
MCF2L-212ENST00000420013 SRA1Q9HD15 236 aaKnown RBP17.09■□□□□ 0.33
MCF2L-212ENST00000420013 TMEM100Q9NV29 134 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms